Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hupe / urej protein | DER08_05365 | Not Available | Positive | 1127137 - 1127730 | 22263.0 |
| cmp deaminase | DER08_05370 | Not Available | Positive | 1127733 - 1128167 | 16305.4 |
| pyridine nucleotide-disulfide oxidoreductase | DER08_05375 | Not Available | Negative | 1128173 - 1128790 | 21909.4 |
| hypothetical protein | DER08_05380 | Not Available | Negative | 1128783 - 1128980 | 7314.39 |
| hypothetical protein | DER08_05385 | Not Available | Negative | 1129046 - 1129624 | 20932.7 |
| duf3109 domain-containing protein | DER08_05390 | Not Available | Positive | 1129771 - 1130337 | 21100.2 |
| ribonucleoside-diphosphate reductase | DER08_05395 | Not Available | Positive | 1130606 - 1131583 | 37707.8 |
| ribonucleoside-diphosphate reductase subunit alpha | DER08_05400 | Not Available | Positive | 1131695 - 1134121 | 92188.9 |
| leucyl/phenylalanyl-trna--protein transferase | DER08_05405 | Not Available | Positive | 1134214 - 1134849 | 24140.0 |
| dna-3-methyladenine glycosylase i | DER08_05410 | Not Available | Negative | 1134903 - 1135463 | 21644.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
