Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosylhomocysteinase | DER08_05215 | Not Available | Positive | 1097546 - 1098862 | 48085.9 |
| duf1761 domain-containing protein | DER08_05220 | Not Available | Positive | 1098990 - 1099478 | 18082.7 |
| 50s ribosomal protein l27 | DER08_05225 | Not Available | Negative | 1099556 - 1099816 | 9402.32 |
| 50s ribosomal protein l21 | DER08_05230 | Not Available | Negative | 1099842 - 1100288 | 16044.7 |
| peptidase m16 | DER08_05235 | Not Available | Positive | 1100540 - 1101865 | 50244.9 |
| peptidase m16 | DER08_05240 | Not Available | Positive | 1101922 - 1103922 | 72818.8 |
| permease | DER08_05245 | Not Available | Negative | 1103971 - 1104837 | 31579.0 |
| heavy metal transporter | DER08_05250 | Not Available | Positive | 1104934 - 1105311 | 13394.2 |
| gliding motility lipoprotein gldd | DER08_05255 | Not Available | Negative | 1105362 - 1105925 | 21654.2 |
| single-stranded dna-binding protein | DER08_05260 | Not Available | Negative | 1105952 - 1106365 | 15713.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
