Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | DER08_05115 | Not Available | Negative | 1077563 - 1078033 | 17665.7 |
| uroporphyrinogen-iii synthase | DER08_05120 | Not Available | Negative | 1078181 - 1078930 | 28541.6 |
| duf4271 domain-containing protein | DER08_05125 | Not Available | Negative | 1078944 - 1079615 | 26270.5 |
| dolichyl-phosphate beta-d-mannosyltransferase | DER08_05130 | Not Available | Positive | 1079722 - 1080447 | 27588.3 |
| dihydroorotase | DER08_05135 | Not Available | Positive | 1080460 - 1081800 | 49726.6 |
| duf4296 domain-containing protein | DER08_05140 | Not Available | Positive | 1081805 - 1082251 | 17196.7 |
| hypothetical protein | DER08_05145 | Not Available | Negative | 1082307 - 1085588 | 126386.0 |
| Trna-gln | Not Available | Not Available | Positive | 1085815 - 1085885 | Not Available |
| nad-dependent epimerase | DER08_05155 | Not Available | Negative | 1085937 - 1086926 | 36986.4 |
| tyrosine--trna ligase | DER08_05160 | Not Available | Positive | 1087056 - 1088351 | 48347.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
