Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cation/h(+) antiporter | DER08_05065 | Not Available | Positive | 1064806 - 1067076 | 83914.9 |
| hypothetical protein | DER08_05070 | Not Available | Negative | 1067065 - 1069551 | 95004.0 |
| ribosome recycling factor | DER08_05075 | Not Available | Negative | 1069639 - 1070202 | 20659.8 |
| ump kinase | DER08_05080 | Not Available | Negative | 1070278 - 1070985 | 25571.1 |
| thioredoxin family protein | DER08_05085 | Not Available | Positive | 1071143 - 1071748 | 23085.0 |
| trna pseudouridine(55) synthase trub | DER08_05090 | Not Available | Negative | 1071720 - 1072430 | 26535.0 |
| udp-diphosphatase | DER08_05095 | Not Available | Negative | 1072435 - 1073244 | 29935.5 |
| duf3098 domain-containing protein | DER08_05100 | Not Available | Negative | 1073245 - 1073490 | 8991.14 |
| cell division protein ftsx | DER08_05105 | Not Available | Negative | 1073526 - 1074401 | 32969.8 |
| leucine--trna ligase | DER08_05110 | Not Available | Positive | 1074599 - 1077475 | 108484.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
