Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii effector | DER08_05015 | Not Available | Negative | 1053497 - 1053841 | 12660.6 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | DER08_05020 | Not Available | Negative | 1053845 - 1054558 | 26384.0 |
| hypothetical protein | DER08_05025 | Not Available | Negative | 1054591 - 1055514 | 36052.8 |
| thymidine kinase | DER08_05030 | Not Available | Positive | 1055708 - 1056295 | 21928.2 |
| hypothetical protein | DER08_05035 | Not Available | Negative | 1056354 - 1056800 | 17106.4 |
| hypothetical protein | DER08_05040 | Not Available | Negative | 1056933 - 1058318 | 52675.1 |
| rna polymerase sigma-54 factor | DER08_05045 | Not Available | Negative | 1058669 - 1060135 | 56595.9 |
| gxxexxy protein | DER08_05050 | Not Available | Negative | 1060211 - 1060606 | 15155.8 |
| asparagine--trna ligase | DER08_05055 | Not Available | Negative | 1060642 - 1062075 | 54441.7 |
| transporter | DER08_05060 | Not Available | Negative | 1062219 - 1064639 | 91756.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
