Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome silencing factor | DER08_00455 | Not Available | Negative | 97537 - 97908 | 14003.6 |
| biotin--[acetyl-coa-carboxylase] ligase | DER08_00460 | Not Available | Positive | 98007 - 98735 | 26908.6 |
| orotate phosphoribosyltransferase | DER08_00465 | Not Available | Negative | 98788 - 99180 | 14385.8 |
| orotate phosphoribosyltransferase | DER08_00470 | Not Available | Negative | 99199 - 99840 | 23717.3 |
| nudix hydrolase | DER08_00475 | Not Available | Positive | 99848 - 100447 | 23157.1 |
| rna methyltransferase | DER08_00480 | Not Available | Negative | 100519 - 101739 | 46773.8 |
| potassium transporter kup | DER08_00485 | Not Available | Negative | 101856 - 103820 | 73676.7 |
| oxidoreductase | DER08_00490 | Not Available | Positive | 104025 - 105068 | 38681.8 |
| sensor of ecf-type sigma factor | DER08_00495 | Not Available | Negative | 105116 - 105574 | 18128.2 |
| hypothetical protein | DER08_00500 | Not Available | Negative | 105598 - 106011 | 15748.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
