[Clostridium] symbiosum strain 2789STDY5834864

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Otoolea

Description

Clostridium symbiosum strain 2789STDY5834864 is a Gram-negative bacterium primarily located in the gut of Homo sapiens. This strain is characterized by possessing a single replicon, which may indicate a streamlined genomic structure typical of certain gut microbiota. The specific accession number for this strain is CYZY00000000.1, providing a reference for further genomic and functional studies. The gut habitat of C. symbiosum suggests its potential role in the complex microbial ecosystem of the human gastrointestinal tract. As part of the gut microbiome, this bacterium may contribute to various metabolic processes and play a role in maintaining gut health. The presence of Clostridium species in the gut is often associated with fermentation processes and the production of short-chain fatty acids, which are beneficial for colon health and can influence systemic metabolism. Understanding the specific traits and ecological roles of Clostridium symbiosum strain 2789STDY5834864 could provide insights into its contributions to human health and disease. Given its association with Homo sapiens, further research into this strain might reveal important implications for gut microbiota management and therapeutic applications in gastrointestinal disorders.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusOtoolea
Species[Clostridium] symbiosum
Strainstrain 2789STDY5834864

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

[Clostridium] symbiosum strain 2789STDY5834864 genome assembly,

Gene Summary

Adenine Count

1241173 bp

Thymine Count

1218212 bp

Guanine Count

1153421 bp

Cytosine Count

1111261 bp

Genome Length

4727130 bp

Protein-coding Genes

4064 genes

Non-Coding Genes

129 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uncharacterised proteinERS852479_01570Not AvailablePositive1711813 - 171216613429.9
AttrNot AvailableNot AvailablePositive1712014 - 1712025Not Available
Putative phage site-specific recombinaseERS852479_01571Not AvailablePositive1712301 - 171367453601.0
AttlNot AvailableNot AvailablePositive2528966 - 2528979Not Available
Tyrosine-type recombinase/integraseERS852479_02323Not AvailableNegative2529835 - 253087540913.7
Hypothetical proteinERS852479_02324Not AvailableNegative2531164 - 25313285991.47
Probable transcriptional repressorERS852479_02325Not AvailableNegative2531380 - 253201823527.3
Toxin-antitoxin system, antitoxin component, xre family proteinERS852479_02326Not AvailablePositive2532148 - 25323908872.6
uncharacterised proteinERS852479_02327Not AvailablePositive2532392 - 253265510307.5
uncharacterised proteinERS852479_02328Not AvailablePositive2533532 - 25337538081.84

Displaying genes 71 – 80 of 4193 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.