Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain 2789STDY5834864 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1241173 bp
Thymine Count
1218212 bp
Guanine Count
1153421 bp
Cytosine Count
1111261 bp
Genome Length
4727130 bp
Protein-coding Genes
4064 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | ERS852479_01570 | Not Available | Positive | 1711813 - 1712166 | 13429.9 |
| Attr | Not Available | Not Available | Positive | 1712014 - 1712025 | Not Available |
| Putative phage site-specific recombinase | ERS852479_01571 | Not Available | Positive | 1712301 - 1713674 | 53601.0 |
| Attl | Not Available | Not Available | Positive | 2528966 - 2528979 | Not Available |
| Tyrosine-type recombinase/integrase | ERS852479_02323 | Not Available | Negative | 2529835 - 2530875 | 40913.7 |
| Hypothetical protein | ERS852479_02324 | Not Available | Negative | 2531164 - 2531328 | 5991.47 |
| Probable transcriptional repressor | ERS852479_02325 | Not Available | Negative | 2531380 - 2532018 | 23527.3 |
| Toxin-antitoxin system, antitoxin component, xre family protein | ERS852479_02326 | Not Available | Positive | 2532148 - 2532390 | 8872.6 |
| uncharacterised protein | ERS852479_02327 | Not Available | Positive | 2532392 - 2532655 | 10307.5 |
| uncharacterised protein | ERS852479_02328 | Not Available | Positive | 2533532 - 2533753 | 8081.84 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
