Agathobacter rectalis strain 2789STDY5608860

Gram-positiveRodNon-motileAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Agathobacter

Description

Agathobacter rectalis strain 2789STDY5608860 is a Gram-positive, non-motile, rod-shaped bacterium classified as a chemoheterotroph. This organism thrives in anaerobic environments and has an optimal growth temperature of 37°C, placing it within the mesophilic temperature range. Notably, Agathobacter rectalis exhibits a singular replicon and possesses one membrane, characteristics that contribute to its metabolic adaptability in various habitats, including those associated with Homo sapiens. As a free-living microorganism, Agathobacter rectalis plays a role in diverse ecological niches. Its ability to utilize organic compounds for energy while thriving in low-oxygen conditions highlights its potential importance in the gut microbiota of humans and possibly other environments where anaerobic conditions prevail. The non-sporulating nature of this strain suggests that it relies on other survival strategies in fluctuating environments rather than forming spores. The ecological insights provided by the traits of Agathobacter rectalis strain 2789STDY5608860 emphasize its role in maintaining microbial diversity and functionality in anaerobic ecosystems. Understanding such organisms can enhance our knowledge of microbial interactions and their implications for human health, particularly in relation to gut microbiome dynamics. The accession number for this strain is CYYW00000000.1, which facilitates further research and exploration into its characteristics and ecological role.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusAgathobacter
SpeciesAgathobacter rectalis
Strainstrain 2789STDY5608860

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Agathobacter rectalis strain 2789STDY5608860
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Agathobacter rectalis strain 2789STDY5608860


Gene Summary

Adenine Count

941983 bp

Thymine Count

986912 bp

Guanine Count

644302 bp

Cytosine Count

696512 bp

Genome Length

3275056 bp

Protein-coding Genes

3005 genes

Non-Coding Genes

114 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Uracil-dna glycosylaseERS852417_00810Not AvailableNegative876173 - 87685025663.6
imidazole glycerol phosphate synthase subunit hisfERS852417_00811Not AvailableNegative876867 - 87762827206.3
imidazole glycerol phosphate synthase subunit hish 1ERS852417_00812Not AvailableNegative877630 - 87824422396.9
AttlNot AvailableNot AvailablePositive878359 - 878380Not Available
IntegraseERS852417_00813Not AvailableNegative878395 - 87963648193.9
excisionase from transposon tn916ERS852417_00814Not AvailableNegative879715 - 8798977211.91
HolinERS852417_00815Not AvailableNegative880005 - 8802207746.51
Hypothetical proteinERS852417_00816Not AvailableNegative880207 - 88054213039.7
Reverse transcriptaseERS852417_00817Not AvailableNegative880555 - 88099517222.4
Reverse transcriptaseERS852417_00818Not AvailableNegative881031 - 88172627725.2

Displaying genes 1 – 10 of 3119 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.