Parabacteroides distasonis strain 2789STDY5608872

Gram-positiveRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Tannerellaceae

Genus

Parabacteroides

Description

Parabacteroides distasonis strain 2789STDY5608872 is a Gram-positive, anaerobic bacterium characterized by its rod shape and absence of mobility. This strain is found in a host-associated habitat, specifically in Homo sapiens, and exhibits a free-living biotic relationship. It possesses two membranes and a single replicon, which is typical for many bacteria. As a mesophilic organism, P. distasonis thrives within moderate temperature ranges, which aligns with the typical conditions found in the human gastrointestinal tract where it is commonly located. Notably, this strain does not form spores, indicating a lifestyle reliant on stable environmental conditions for its survival and proliferation. The presence of flagella suggests that P. distasonis may exhibit some degree of motility under certain conditions, although it is classified as non-motile in this context. The accession number for this strain is CYXP00000000.1, which allows for further reference and study within microbial databases. The ecological insight provided by these traits indicates that Parabacteroides distasonis plays a role in the complex microbiome of humans, potentially contributing to gut health and metabolic processes. Its free-living nature, combined with its anaerobic lifestyle, suggests it may participate in fermentation processes within the gut, influencing nutrient absorption and overall gut ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyTannerellaceae
GenusParabacteroides
SpeciesParabacteroides distasonis
Strainstrain 2789STDY5608872

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Parabacteroides distasonis strain 2789STDY5608872
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parabacteroides distasonis strain 2789STDY5608872


Gene Summary

Adenine Count

1418239 bp

Thymine Count

1382379 bp

Guanine Count

1119846 bp

Cytosine Count

1174227 bp

Genome Length

5099398 bp

Protein-coding Genes

4263 genes

Non-Coding Genes

77 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
AttlNot AvailableNot AvailablePositive3103167 - 3103178Not Available
Putative site-specific recombinaseERS852429_02666Not AvailableNegative3103360 - 310395623875.6
uncharacterised proteinERS852429_02667Not AvailableNegative3103966 - 31040644008.18
Dna ligaseERS852429_02668Q5UPZ0Negative3104103 - 310605572608.8
uncharacterised proteinERS852429_02669Not AvailableNegative3106042 - 310662322374.6
Phi92_gp043ERS852429_02670O33481Negative3106620 - 310752534259.7
uncharacterised proteinERS852429_02671Not AvailableNegative3107522 - 31077649421.45
uncharacterised proteinERS852429_02672Not AvailableNegative3107761 - 310803610891.1
Kila proteinERS852429_02673Not AvailableNegative3108093 - 310934047894.2
uncharacterized phage-encoded proteinERS852429_02674Not AvailableNegative3109324 - 311010030446.3

Displaying genes 1 – 10 of 4340 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

195 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000047sophoroseC12H22O11Chemical structure of sophoroseNot available
Average342.297Da
Monoisotopic342.116211528Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000275keto-D-sorboseC6H12O6Chemical structure of keto-D-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000315acetylpyruvateC5H6O4Chemical structure of acetylpyruvateNot available
Average130.099Da
Monoisotopic130.0266087Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da

Displaying 1–10 of 195 metabolites

Health Effects

No health effects information available for this bacterium.