Parabacteroides distasonis strain 2789STDY5608872

Gram-positiveRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Tannerellaceae

Genus

Parabacteroides

Description

Parabacteroides distasonis strain 2789STDY5608872 is a Gram-positive, anaerobic bacterium characterized by its rod shape and absence of mobility. This strain is found in a host-associated habitat, specifically in Homo sapiens, and exhibits a free-living biotic relationship. It possesses two membranes and a single replicon, which is typical for many bacteria. As a mesophilic organism, P. distasonis thrives within moderate temperature ranges, which aligns with the typical conditions found in the human gastrointestinal tract where it is commonly located. Notably, this strain does not form spores, indicating a lifestyle reliant on stable environmental conditions for its survival and proliferation. The presence of flagella suggests that P. distasonis may exhibit some degree of motility under certain conditions, although it is classified as non-motile in this context. The accession number for this strain is CYXP00000000.1, which allows for further reference and study within microbial databases. The ecological insight provided by these traits indicates that Parabacteroides distasonis plays a role in the complex microbiome of humans, potentially contributing to gut health and metabolic processes. Its free-living nature, combined with its anaerobic lifestyle, suggests it may participate in fermentation processes within the gut, influencing nutrient absorption and overall gut ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyTannerellaceae
GenusParabacteroides
SpeciesParabacteroides distasonis
Strainstrain 2789STDY5608872

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Parabacteroides distasonis strain 2789STDY5608872
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parabacteroides distasonis strain 2789STDY5608872 genome assembly,

Gene Summary

Adenine Count

1418239 bp

Thymine Count

1382379 bp

Guanine Count

1119846 bp

Cytosine Count

1174227 bp

Genome Length

5099398 bp

Protein-coding Genes

4263 genes

Non-Coding Genes

77 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
photosystem i iron-sulfur centerERS852429_00775Not AvailablePositive907111 - 9073388121.1
pyruvate synthase subunit poraERS852429_00776O26800Positive907353 - 90843239233.8
uncharacterised proteinERS852429_00777Not AvailablePositive908438 - 9086086227.91
pyruvate synthase subunit porbERS852429_00778Not AvailablePositive908621 - 90938527619.6
pyruvate synthase subunit porcERS852429_00779P80907Positive909404 - 90994619827.6
uncharacterised proteinERS852429_00780Not AvailablePositive909964 - 91213282180.0
membrane-bound lytic murein transglycosylase f precursorERS852429_00781Q6LU25Positive912142 - 91296631521.0
virulence sensor protein bvgs precursorERS852429_00782Not AvailableNegative912969 - 91483771094.9
atp-dependent rna helicase rhleERS852429_00783Q8Y8N0Positive914854 - 91625452697.9
transcription termination factor rhoERS852429_00784C7LJY3Negative916351 - 91833373755.9

Displaying genes 791 – 800 of 4340 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

195 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000047sophoroseC12H22O11Chemical structure of sophoroseNot available
Average342.297Da
Monoisotopic342.116211528Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000275keto-D-sorboseC6H12O6Chemical structure of keto-D-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000315acetylpyruvateC5H6O4Chemical structure of acetylpyruvateNot available
Average130.099Da
Monoisotopic130.0266087Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da

Displaying 1–10 of 195 metabolites

Health Effects

No health effects information available for this bacterium.