Psychrobacter sp. JCM 18900

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Moraxellales

Family

Moraxellaceae

Genus

Psychrobacter

Description

Psychrobacter sp. JCM 18900 is a psychrophilic bacterium known for its ability to thrive in cold environments. One of the notable traits of this species is the presence of flagella, which facilitates motility and allows the bacterium to navigate its surroundings effectively. Additionally, Psychrobacter sp. JCM 18900 possesses a single replicon, indicating a streamlined genetic structure that may be advantageous for adaptation to its ecological niche. The genome of Psychrobacter sp. JCM 18900 has been sequenced and is accessible under the accession number BAWG00000000.1. This genetic information can provide insights into its metabolic pathways and potential adaptations to cold habitats. Psychrobacter species are often found in marine environments, including polar regions, where low temperatures are prevalent. Their psychrophilic nature suggests that they play a significant role in biogeochemical cycles in such ecosystems, contributing to the decomposition of organic matter and influencing nutrient cycling. Furthermore, the presence of flagella may enhance their ability to colonize specific niches within these habitats, facilitating interactions with other microbial communities. In summary, Psychrobacter sp. JCM 18900 exhibits key traits such as flagella presence and a single replicon, which are indicative of its adaptations to cold environments and its ecological role in nutrient cycling within marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMoraxellales
FamilyMoraxellaceae
GenusPsychrobacter
SpeciesPsychrobacter sp. JCM 18900
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Psychrobacter sp. JCM 18900


Gene Summary

Adenine Count

937026 bp

Thymine Count

936757 bp

Guanine Count

721070 bp

Cytosine Count

677792 bp

Genome Length

3272645 bp

Protein-coding Genes

2893 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
na(+)-translocating nadh-quinone reductase subunit eJCM18900_1Not AvailablePositive42 - 50616494.7
Small subunit ribosomal rnaNot AvailableNot AvailablePositive409 - 1889Not Available
na(+)-translocating nadh-quinone reductase subunit fJCM18900_2Not AvailablePositive629 - 186445908.6
3-oxoacyl-[acyl-carrier protein] reductaseJCM18900_3Not AvailablePositive2039 - 283928817.8
Large subunit ribosomal rnaNot AvailableNot AvailablePositive2505 - 5359Not Available
thiamin biosynthesis lipoprotein apbeJCM18900_4Not AvailablePositive3102 - 411836565.8
probable exported proteinJCM18900_5Not AvailablePositive4320 - 44514894.39
probable exported proteinJCM18900_6Not AvailablePositive4448 - 45644088.76
cyanate mfs transporterJCM18900_8Not AvailablePositive4961 - 619444155.4
5s ribosomal rnaNot AvailableNot AvailablePositive5545 - 5660Not Available

Displaying genes 1 – 10 of 2936 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.