Psychrobacter sp. JCM 18900

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Moraxellales

Family

Moraxellaceae

Genus

Psychrobacter

Description

Psychrobacter sp. JCM 18900 is a psychrophilic bacterium known for its ability to thrive in cold environments. One of the notable traits of this species is the presence of flagella, which facilitates motility and allows the bacterium to navigate its surroundings effectively. Additionally, Psychrobacter sp. JCM 18900 possesses a single replicon, indicating a streamlined genetic structure that may be advantageous for adaptation to its ecological niche. The genome of Psychrobacter sp. JCM 18900 has been sequenced and is accessible under the accession number BAWG00000000.1. This genetic information can provide insights into its metabolic pathways and potential adaptations to cold habitats. Psychrobacter species are often found in marine environments, including polar regions, where low temperatures are prevalent. Their psychrophilic nature suggests that they play a significant role in biogeochemical cycles in such ecosystems, contributing to the decomposition of organic matter and influencing nutrient cycling. Furthermore, the presence of flagella may enhance their ability to colonize specific niches within these habitats, facilitating interactions with other microbial communities. In summary, Psychrobacter sp. JCM 18900 exhibits key traits such as flagella presence and a single replicon, which are indicative of its adaptations to cold environments and its ecological role in nutrient cycling within marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMoraxellales
FamilyMoraxellaceae
GenusPsychrobacter
SpeciesPsychrobacter sp. JCM 18900
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Psychrobacter sp. JCM 18900 DNA, contig: JCM18900.contig00035,

Gene Summary

Adenine Count

937026 bp

Thymine Count

936757 bp

Guanine Count

721070 bp

Cytosine Count

677792 bp

Genome Length

3272645 bp

Protein-coding Genes

2893 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinJCM18900_19Not AvailablePositive17132 - 1755415953.1
Trna-pheNot AvailableNot AvailablePositive17678 - 17750Not Available
hypothetical proteinJCM18900_20Not AvailableNegative17972 - 181727469.9
putative cytoplasmic proteinJCM18900_21Not AvailablePositive18443 - 1894419665.1
phosphoglycolate phosphataseJCM18900_22Not AvailablePositive19062 - 1974625143.9
mg(2+) chelatase family proteinJCM18900_23Not AvailableNegative19797 - 2137756889.0
coproporphyrinogen iii oxidase, oxygen-independentJCM18900_24Not AvailablePositive21732 - 2330259731.3
putative stomatin/prohibitin-family membrane protease subunit ybbkJCM18900_25Not AvailableNegative23380 - 2424031731.5
putative activity regulator of membrane protease ybbkJCM18900_26Not AvailableNegative24257 - 2475017848.5
outer membrane protein a precursorJCM18900_27Not AvailableNegative24947 - 2553121081.2

Displaying genes 21 – 30 of 2936 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.