Paraglaciecola arctica BSs20135

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Alteromonadaceae

Genus

Paraglaciecola

Description

Paraglaciecola arctica BSs20135 is a Gram-negative bacterium characterized by a single replicon in its genome. This organism is notable for its adaptability to cold environments, which is reflected in its classification within the genus Paraglaciecola. The complete genomic sequence of Paraglaciecola arctica is available under the accession number BAEO00000000.1, providing a comprehensive reference for further studies and understanding of its genetic makeup. As a member of the Paraglaciecola genus, P. arctica is likely to exhibit characteristics that enable survival in polar and subpolar habitats, commonly associated with cold-adapted microorganisms. These traits may include specialized metabolic pathways that facilitate growth at low temperatures and the ability to utilize diverse substrates found in its environment. The ecological significance of Paraglaciecola arctica lies in its potential role in biogeochemical cycles within polar ecosystems. By contributing to the decomposition of organic matter and nutrient cycling, this bacterium may influence the overall health and stability of its habitat. Furthermore, understanding the genetic and metabolic characteristics of P. arctica could provide insights into microbial adaptations to climate change, particularly in Arctic regions where temperatures are rising and ecosystems are undergoing rapid transformation.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyAlteromonadaceae
GenusParaglaciecola
SpeciesParaglaciecola arctica
StrainBSs20135

Profile

Physiology
Gram staining propertiesGram-negative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paraglaciecola arctica BSs20135


Gene Summary

Adenine Count

1783371 bp

Thymine Count

1789675 bp

Guanine Count

1186432 bp

Cytosine Count

1204978 bp

Genome Length

5964456 bp

Protein-coding Genes

5333 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-alaNot AvailableNot AvailablePositive3603 - 3678Not Available
Trna-ileNot AvailableNot AvailablePositive3714 - 3790Not Available
transposase is200-family proteinGARC_0003Not AvailableNegative5700 - 610416118.5
hypothetical proteinGARC_0004Not AvailablePositive6311 - 64364996.37
hypothetical proteinGARC_0005Not AvailableNegative6449 - 733632867.3
carboxypeptidase pm20d1GARC_0006Q55FR8Positive7425 - 890054172.1
glutathione-dependent formaldehyde-activating, gfaGARC_0007Not AvailableNegative8913 - 932014968.6
hypothetical proteinGARC_0008Not AvailableNegative9339 - 971913851.0
hypothetical proteinGARC_0009Not AvailablePositive9806 - 1059130011.2
antitoxin yefmGARC_0010P58235Positive10717 - 109719596.37

Displaying genes 1 – 10 of 5383 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

307 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000047sophoroseC12H22O11Chemical structure of sophoroseNot available
Average342.297Da
Monoisotopic342.116211528Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002583-(carbamoylamino)propanoateC4H7N2O3Chemical structure of 3-(carbamoylamino)propanoateNot available
Average131.112Da
Monoisotopic131.046215673Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da

Displaying 1–10 of 307 metabolites

Health Effects

No health effects information available for this bacterium.