Rhodococcus rhodochrous ATCC 21198

Gram-positiveCocciNon-motileAerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus rhodochrous ATCC 21198 is a Gram-positive bacterium primarily found in soil habitats. As a chemoheterotroph, it derives energy from organic compounds. This species is classified as an aerobe, requiring oxygen for its metabolic processes. The bacteria exhibit a cocci shape and do not display mobility, as they lack flagella. R. rhodochrous ATCC 21198 has a mesophilic temperature range, indicating its optimal growth occurs at moderate temperatures, which is typical for many soil-dwelling microorganisms. It contains a single replicon and is characterized as nonsporulating, meaning it does not form spores, which can be a survival mechanism for many bacteria under adverse environmental conditions. The ecological role of R. rhodochrous ATCC 21198 in soil environments may relate to its ability to degrade various organic compounds, contributing to nutrient cycling and soil health. Its presence in the soil ecosystem highlights the importance of such microorganisms in maintaining ecological balance and supporting plant growth. Understanding the traits and behaviors of R. rhodochrous ATCC 21198 provides insight into the functional diversity of soil microbiota and their interactions with the environment.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus rhodochrous
StrainATCC 21198

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Rhodococcus rhodochrous ATCC 21198
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Rhodococcus rhodochrous ATCC 21198


Gene Summary

Adenine Count

964465 bp

Thymine Count

964932 bp

Guanine Count

2275816 bp

Cytosine Count

2272336 bp

Genome Length

6477549 bp

Protein-coding Genes

5936 genes

Non-Coding Genes

158 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
IntegraseRR21198_3096Not AvailablePositive3140231 - 314108531458.8
hypothetical proteinRR21198_3097Not AvailablePositive3141104 - 31412746180.26
Hypothetical proteinRR21198_3098Not AvailablePositive3141362 - 314179914847.2
hypothetical proteinRR21198_3099Not AvailableNegative3141861 - 314222012831.1
Hnh endonucleaseRR21198_3100Not AvailableNegative3142518 - 314325827852.0
Hth dna binding domain proteinRR21198_3101Not AvailableNegative3143672 - 314401012411.7
hypothetical proteinRR21198_3102Not AvailableNegative3144007 - 31442047229.42
hypothetical proteinRR21198_3103Not AvailableNegative3144201 - 314450911856.1
Hnh endonucleaseRR21198_3104Not AvailableNegative3144557 - 314503618591.3
hypothetical proteinRR21198_3105Not AvailableNegative3145207 - 314673953258.7

Displaying genes 1 – 10 of 42 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

452 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001360methanesulfonateCH3O3SChemical structure of methanesulfonate59721-29-8
Average95.09Da
Monoisotopic94.980838711Da
BASm0001593L-xylo-hex-3-ulonolactoneC6H8O6Chemical structure of L-xylo-hex-3-ulonolactoneNot available
Average176.1241Da
Monoisotopic176.032087988Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da

Displaying 1–10 of 452 metabolites

Health Effects

No health effects information available for this bacterium.