Rhodococcus rhodnii LMG 5362

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus rhodnii LMG 5362 is a mesophilic bacterium characterized by the presence of flagella, which facilitates motility. This species thrives optimally at a temperature of 29°C, indicating its adaptation to moderate environmental conditions. R. rhodnii is capable of sporulation, which allows it to survive adverse conditions by forming resilient spores. The genome of R. rhodnii LMG 5362 consists of a single replicon, as indicated by the accession number APMY00000000.1. This characteristic can influence the bacterium's genetic stability and adaptability in its ecological niche. In a broader biological context, the ability of R. rhodnii to form spores and its motility suggest its potential role in various environments, likely contributing to soil health and nutrient cycling. The presence of flagella may enhance its ability to navigate through diverse habitats, while sporulation ensures survival during unfavorable conditions. These traits collectively underscore the ecological significance of R. rhodnii in its native environments.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus rhodnii
StrainLMG 5362

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationspore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus rhodnii LMG 5362


Gene Summary

Adenine Count

666004 bp

Thymine Count

661466 bp

Guanine Count

1518192 bp

Cytosine Count

1537913 bp

Genome Length

4383575 bp

Protein-coding Genes

4327 genes

Non-Coding Genes

141 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pseudouridine synthase aRrhod_3991Not AvailableNegative3942165 - 394304031762.7
ribosomal protein l17 rplqRrhod_3992Not AvailableNegative3943047 - 394362520554.1
rna polymerase alpha subunitRrhod_3993Not AvailableNegative3943656 - 394471737965.8
ribosomal protein s4Rrhod_3994Not AvailableNegative3944839 - 394544423603.4
ribosomal protein s11 rpskRrhod_3995Not AvailableNegative3945467 - 394588014667.5
ribosomal protein s13 rpsmRrhod_3996Not AvailableNegative3945880 - 394623913604.4
ribosomal protein l36 rpmjRrhod_3997Not AvailableNegative3946471 - 39465844364.58
initiation factor 1a infaRrhod_3998Not AvailableNegative3946666 - 39468878489.46
acid deacylaseRrhod_3999Not AvailablePositive3947122 - 394756515134.1
secreted metallopeptidaseRrhod_4000Not AvailableNegative3947591 - 394838827495.3

Displaying genes 3981 – 3990 of 4468 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.