Rhodococcus rhodnii LMG 5362

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus rhodnii LMG 5362 is a mesophilic bacterium characterized by the presence of flagella, which facilitates motility. This species thrives optimally at a temperature of 29°C, indicating its adaptation to moderate environmental conditions. R. rhodnii is capable of sporulation, which allows it to survive adverse conditions by forming resilient spores. The genome of R. rhodnii LMG 5362 consists of a single replicon, as indicated by the accession number APMY00000000.1. This characteristic can influence the bacterium's genetic stability and adaptability in its ecological niche. In a broader biological context, the ability of R. rhodnii to form spores and its motility suggest its potential role in various environments, likely contributing to soil health and nutrient cycling. The presence of flagella may enhance its ability to navigate through diverse habitats, while sporulation ensures survival during unfavorable conditions. These traits collectively underscore the ecological significance of R. rhodnii in its native environments.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus rhodnii
StrainLMG 5362

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationspore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus rhodnii LMG 5362


Gene Summary

Adenine Count

666004 bp

Thymine Count

661466 bp

Guanine Count

1518192 bp

Cytosine Count

1537913 bp

Genome Length

4383575 bp

Protein-coding Genes

4327 genes

Non-Coding Genes

141 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna ligase (atp)Rrhod_3379Not AvailablePositive3335570 - 333659838057.9
hypothetical proteinRrhod_3380Not AvailablePositive3336654 - 333716915173.9
lipoproteinRrhod_3381Not AvailablePositive3337283 - 333822733631.7
abc sugar transporterRrhod_3382Not AvailablePositive3338346 - 333925433609.3
hypothetical proteinRrhod_3383Not AvailableNegative3339616 - 33397083316.11
major facilitator superfamily multidrugRrhod_3384Not AvailableNegative3339737 - 334073533896.3
transcriptional regulatorRrhod_3385Not AvailableNegative3340880 - 334164129106.9
hypothetical proteinRrhod_3386Not AvailableNegative3341768 - 334279636340.5
transcriptional regulatorRrhod_3387Not AvailableNegative3342843 - 334346622316.7
hypothetical proteinRrhod_3388Not AvailablePositive3343577 - 334412520896.3

Displaying genes 3371 – 3380 of 4468 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.