Rhodococcus rhodnii LMG 5362

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus rhodnii LMG 5362 is a mesophilic bacterium characterized by the presence of flagella, which facilitates motility. This species thrives optimally at a temperature of 29°C, indicating its adaptation to moderate environmental conditions. R. rhodnii is capable of sporulation, which allows it to survive adverse conditions by forming resilient spores. The genome of R. rhodnii LMG 5362 consists of a single replicon, as indicated by the accession number APMY00000000.1. This characteristic can influence the bacterium's genetic stability and adaptability in its ecological niche. In a broader biological context, the ability of R. rhodnii to form spores and its motility suggest its potential role in various environments, likely contributing to soil health and nutrient cycling. The presence of flagella may enhance its ability to navigate through diverse habitats, while sporulation ensures survival during unfavorable conditions. These traits collectively underscore the ecological significance of R. rhodnii in its native environments.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus rhodnii
StrainLMG 5362

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationspore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus rhodnii LMG 5362 LMG_5362_contig162, whole genome

Gene Summary

Adenine Count

666004 bp

Thymine Count

661466 bp

Guanine Count

1518192 bp

Cytosine Count

1537913 bp

Genome Length

4383575 bp

Protein-coding Genes

4327 genes

Non-Coding Genes

141 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
siderophore interacting proteinRrhod_2125Not AvailableNegative2034087 - 203490829836.2
2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthaseRrhod_2126Not AvailablePositive2035011 - 203666356822.8
hypothetical proteinRrhod_2127Not AvailablePositive2036660 - 203713917157.6
glycosyl transferaseRrhod_2128Not AvailablePositive2037163 - 203832941235.4
ubiquinoneRrhod_2129Not AvailablePositive2038375 - 203908825510.5
dehydrogenaseRrhod_2130Not AvailableNegative2039110 - 204037544071.6
polyprenyl synthetaseRrhod_2131Not AvailablePositive2040528 - 204158337109.8
heat shock protein htpxRrhod_2132Not AvailablePositive2041700 - 204257230914.8
putative nucleotide-binding proteinRrhod_2133Not AvailableNegative2042591 - 204308217976.2
Trna-tyrNot AvailableNot AvailablePositive2043282 - 2043367Not Available

Displaying genes 2121 – 2130 of 4468 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.