Rhodococcus rhodnii LMG 5362

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus rhodnii LMG 5362 is a mesophilic bacterium characterized by the presence of flagella, which facilitates motility. This species thrives optimally at a temperature of 29°C, indicating its adaptation to moderate environmental conditions. R. rhodnii is capable of sporulation, which allows it to survive adverse conditions by forming resilient spores. The genome of R. rhodnii LMG 5362 consists of a single replicon, as indicated by the accession number APMY00000000.1. This characteristic can influence the bacterium's genetic stability and adaptability in its ecological niche. In a broader biological context, the ability of R. rhodnii to form spores and its motility suggest its potential role in various environments, likely contributing to soil health and nutrient cycling. The presence of flagella may enhance its ability to navigate through diverse habitats, while sporulation ensures survival during unfavorable conditions. These traits collectively underscore the ecological significance of R. rhodnii in its native environments.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus rhodnii
StrainLMG 5362

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationspore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus rhodnii LMG 5362 LMG_5362_contig162, whole genome

Gene Summary

Adenine Count

666004 bp

Thymine Count

661466 bp

Guanine Count

1518192 bp

Cytosine Count

1537913 bp

Genome Length

4383575 bp

Protein-coding Genes

4327 genes

Non-Coding Genes

141 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
marr family transcriptional regulatorRrhod_1664Not AvailablePositive1570809 - 157136320568.1
hypothetical proteinRrhod_1665Not AvailableNegative1571382 - 157187916998.1
hypothetical proteinRrhod_1666Not AvailableNegative1571901 - 157271930467.5
hypothetical proteinRrhod_1667Not AvailablePositive1572775 - 157369232983.9
methylmalonate-semialdehyde dehydrogenaseRrhod_1668Not AvailablePositive1573782 - 157530554084.2
3-hydroxyisobutyrate dehydrogenaseRrhod_1669Not AvailablePositive1575325 - 157620929358.7
amidaseRrhod_1670Not AvailableNegative1576192 - 157764349837.1
allantoate amidohydrolaseRrhod_1671Not AvailableNegative1577640 - 157890245766.9
mfs superfamily prolineRrhod_1672Not AvailableNegative1578931 - 158023546155.9
lysr family transcriptional regulatorRrhod_1673Not AvailableNegative1580468 - 158140034053.1

Displaying genes 1661 – 1670 of 4468 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.