Shigella flexneri K-315

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Shigella

Description

Shigella flexneri K-315 is a gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism, allowing it to thrive in various oxygen conditions. This organism is categorized as a chemoorganotroph, utilizing organic compounds as its energy source. Its optimal growth temperature is 37°C, which falls within the mesophilic range, indicating its preference for moderate temperatures typically found within host organisms. The bacterium is characterized by its mobility, facilitated by the presence of flagella, and it typically exists in pairs or as single cells. Shigella flexneri K-315 has a biotic relationship defined as free-living, although it is host-associated, indicating its ability to exist independently while still being able to infect hosts. With a single replicon and a double membrane structure, this strain does not undergo sporulation, which suggests a reliance on its immediate environment for survival and reproduction. The accession number for this strain is AKMY00000000.1, which allows for its identification in genomic databases. Ecologically, Shigella flexneri K-315 plays a significant role in the context of human health, as it is known to be a pathogen that causes shigellosis. The bacterium's ability to maintain mobility and adaptability in various environments underscores its potential for transmission and infection within host populations. Understanding its traits can provide insights into its pathogenic mechanisms and ecological impacts in human settings.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusShigella
SpeciesShigella flexneri
StrainK-315

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Shigella flexneri K-315
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs-Singles
SporulationNonsporulating
Energy source Chemoorganotroph
PathogenicityNot Available

Genome Summary

Shigella flexneri K-315 gssK315.contig.78, whole genome shotgun

Gene Summary

Adenine Count

1113938 bp

Thymine Count

1117256 bp

Guanine Count

1170737 bp

Cytosine Count

1162912 bp

Genome Length

4564844 bp

Protein-coding Genes

4708 genes

Non-Coding Genes

454 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribosomal subunit interface proteinSFK315_3227Not AvailableNegative2805337 - 280562410750.9
rna polymerase sigma-54 factorSFK315_3228Not AvailableNegative2805635 - 280708054465.5
lipopolysaccharide export system atp-binding protein lptbSFK315_3229Not AvailableNegative2807128 - 280785326801.4
lipopolysaccharide transport periplasmic protein lptaSFK315_3230Not AvailableNegative2807860 - 280838118741.3
lipopolysaccharide export system protein lptcSFK315_3231Not AvailableNegative2808386 - 280896121745.9
3-deoxy-d-manno-octulosonate 8-phosphate phosphataseSFK315_3232Not AvailableNegative2808958 - 280952419998.3
putative isomeraseSFK315_3233Not AvailableNegative2809545 - 281053135207.4
inner membrane protein yrbgSFK315_3234Not AvailableNegative2810545 - 281152234756.9
putative phospholipid import atp-binding protein mlafSFK315_3235Not AvailablePositive2811732 - 281254129098.6
putative phospholipid abc transporter permease protein mlaeSFK315_3236Not AvailablePositive2812549 - 281333127865.0

Displaying genes 3271 – 3280 of 5162 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.