Shigella flexneri K-315

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Shigella

Description

Shigella flexneri K-315 is a gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism, allowing it to thrive in various oxygen conditions. This organism is categorized as a chemoorganotroph, utilizing organic compounds as its energy source. Its optimal growth temperature is 37°C, which falls within the mesophilic range, indicating its preference for moderate temperatures typically found within host organisms. The bacterium is characterized by its mobility, facilitated by the presence of flagella, and it typically exists in pairs or as single cells. Shigella flexneri K-315 has a biotic relationship defined as free-living, although it is host-associated, indicating its ability to exist independently while still being able to infect hosts. With a single replicon and a double membrane structure, this strain does not undergo sporulation, which suggests a reliance on its immediate environment for survival and reproduction. The accession number for this strain is AKMY00000000.1, which allows for its identification in genomic databases. Ecologically, Shigella flexneri K-315 plays a significant role in the context of human health, as it is known to be a pathogen that causes shigellosis. The bacterium's ability to maintain mobility and adaptability in various environments underscores its potential for transmission and infection within host populations. Understanding its traits can provide insights into its pathogenic mechanisms and ecological impacts in human settings.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusShigella
SpeciesShigella flexneri
StrainK-315

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Shigella flexneri K-315
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs-Singles
SporulationNonsporulating
Energy source Chemoorganotroph
PathogenicityNot Available

Genome Summary

Shigella flexneri K-315 gssK315.contig.78, whole genome shotgun

Gene Summary

Adenine Count

1113938 bp

Thymine Count

1117256 bp

Guanine Count

1170737 bp

Cytosine Count

1162912 bp

Genome Length

4564844 bp

Protein-coding Genes

4708 genes

Non-Coding Genes

454 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-thrNot AvailableNot AvailablePositive2734669 - 2734744Not Available
hypothetical proteinSFK315_3148Not AvailableNegative2735131 - 273588928570.9
inner membrane amino-acid abc transporter permease protein yhdySFK315_3149Not AvailableNegative2735897 - 273694039283.0
general l-amino acid transport system permease aapq domain proteinSFK315_3150Not AvailableNegative2737010 - 27372438447.63
abc transporter, permease proteinSFK315_3151Not AvailableNegative2737240 - 273751510020.5
amino abc transporter, permease, 3-tm region, his/glu/gln/arg/opine family domain proteinSFK315_3152Not AvailableNegative2737546 - 273817823380.0
putative amino-acid abc transporter binding yhdw domain proteinSFK315_3153Not AvailableNegative2738246 - 27383684535.38
putative transposaseSFK315_3154Not AvailableNegative2738390 - 273889319737.9
transposaseSFK315_3155Not AvailablePositive2738968 - 27391596682.8
dna adenine methyltransferase yhdjSFK315_3156Not AvailableNegative2739220 - 274010433357.2

Displaying genes 3191 – 3200 of 5162 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.