Shigella flexneri K-315

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Shigella

Description

Shigella flexneri K-315 is a gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism, allowing it to thrive in various oxygen conditions. This organism is categorized as a chemoorganotroph, utilizing organic compounds as its energy source. Its optimal growth temperature is 37°C, which falls within the mesophilic range, indicating its preference for moderate temperatures typically found within host organisms. The bacterium is characterized by its mobility, facilitated by the presence of flagella, and it typically exists in pairs or as single cells. Shigella flexneri K-315 has a biotic relationship defined as free-living, although it is host-associated, indicating its ability to exist independently while still being able to infect hosts. With a single replicon and a double membrane structure, this strain does not undergo sporulation, which suggests a reliance on its immediate environment for survival and reproduction. The accession number for this strain is AKMY00000000.1, which allows for its identification in genomic databases. Ecologically, Shigella flexneri K-315 plays a significant role in the context of human health, as it is known to be a pathogen that causes shigellosis. The bacterium's ability to maintain mobility and adaptability in various environments underscores its potential for transmission and infection within host populations. Understanding its traits can provide insights into its pathogenic mechanisms and ecological impacts in human settings.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusShigella
SpeciesShigella flexneri
StrainK-315

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Shigella flexneri K-315
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs-Singles
SporulationNonsporulating
Energy source Chemoorganotroph
PathogenicityNot Available

Genome Summary

Shigella flexneri K-315 gssK315.contig.78, whole genome shotgun

Gene Summary

Adenine Count

1113938 bp

Thymine Count

1117256 bp

Guanine Count

1170737 bp

Cytosine Count

1162912 bp

Genome Length

4564844 bp

Protein-coding Genes

4708 genes

Non-Coding Genes

454 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
periplasmic nitrate (or nitrite) reductase c-type cytochrome, napc/nirt family proteinSFK315_2619Not AvailableNegative2242987 - 224358923129.9
diheme cytochrome c napbSFK315_2620Not AvailableNegative2243599 - 224404816301.4
ferredoxin-type, naph/maun family proteinSFK315_2621Not AvailableNegative2244045 - 224490831889.4
maum/napg ferredoxin-type family proteinSFK315_2622Not AvailableNegative2244895 - 224559024995.2
periplasmic nitrate reductase, large subunitSFK315_2623Not AvailableNegative2245597 - 224808393093.1
napd family proteinSFK315_2624Not AvailableNegative2248080 - 22483108201.5
ferredoxin-type protein napfSFK315_2625Not AvailableNegative2248333 - 224882718047.4
triose phosphate isomerase monomerSFK315_2626Not AvailablePositive2248936 - 22491006191.65
ecotin family proteinSFK315_2627Not AvailablePositive2249235 - 224972318196.0
malate dehydrogenaseSFK315_2628Not AvailableNegative2249873 - 225146258279.5

Displaying genes 2691 – 2700 of 5162 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.