Shigella flexneri K-315

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Shigella

Description

Shigella flexneri K-315 is a gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism, allowing it to thrive in various oxygen conditions. This organism is categorized as a chemoorganotroph, utilizing organic compounds as its energy source. Its optimal growth temperature is 37°C, which falls within the mesophilic range, indicating its preference for moderate temperatures typically found within host organisms. The bacterium is characterized by its mobility, facilitated by the presence of flagella, and it typically exists in pairs or as single cells. Shigella flexneri K-315 has a biotic relationship defined as free-living, although it is host-associated, indicating its ability to exist independently while still being able to infect hosts. With a single replicon and a double membrane structure, this strain does not undergo sporulation, which suggests a reliance on its immediate environment for survival and reproduction. The accession number for this strain is AKMY00000000.1, which allows for its identification in genomic databases. Ecologically, Shigella flexneri K-315 plays a significant role in the context of human health, as it is known to be a pathogen that causes shigellosis. The bacterium's ability to maintain mobility and adaptability in various environments underscores its potential for transmission and infection within host populations. Understanding its traits can provide insights into its pathogenic mechanisms and ecological impacts in human settings.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusShigella
SpeciesShigella flexneri
StrainK-315

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Shigella flexneri K-315
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs-Singles
SporulationNonsporulating
Energy source Chemoorganotroph
PathogenicityNot Available

Genome Summary

Shigella flexneri K-315 gssK315.contig.78, whole genome shotgun

Gene Summary

Adenine Count

1113938 bp

Thymine Count

1117256 bp

Guanine Count

1170737 bp

Cytosine Count

1162912 bp

Genome Length

4564844 bp

Protein-coding Genes

4708 genes

Non-Coding Genes

454 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transposase family proteinSFK315_2290Not AvailableNegative1962811 - 196318514378.3
ea59 domain proteinSFK315_2291Not AvailablePositive1963269 - 19634125436.5
hth-type transcriptional regulator cblSFK315_2292Not AvailableNegative1963582 - 196446033039.6
integrase core domain proteinSFK315_2293Not AvailableNegative1964492 - 196539734330.9
transposase family proteinSFK315_2294Not AvailableNegative1965355 - 196572013452.4
nitrogen assimilation regulatory protein nacSFK315_2295Not AvailableNegative1965970 - 196688732818.0
Trna-asnNot AvailableNot AvailablePositive1967214 - 1967289Not Available
putative l,d-transpeptidase erfk/srfkSFK315_2297Not AvailableNegative1967345 - 196827734403.1
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferaseSFK315_2298Not AvailableNegative1968342 - 196942136894.2
cobalamin 5'-phosphate synthaseSFK315_2299Not AvailableNegative1969433 - 197015525533.3

Displaying genes 2471 – 2480 of 5162 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.