Flavobacterium frigoris PS1 66_52

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium frigoris PS1 66_52 is characterized as a rod-shaped bacterium that possesses flagella, indicating its motility. This organism contains a single replicon, which suggests a streamlined genetic architecture that may facilitate efficient replication and adaptability in various environments. The genomic sequence of this strain is available under the accession number AHKF00000000.1, providing a basis for further genetic and functional studies. The presence of flagella in Flavobacterium frigoris PS1 66_52 highlights its potential ecological roles in aquatic environments, where motility can be advantageous for nutrient acquisition and colonization of surfaces. As a member of the Flavobacterium genus, it is likely to be involved in the degradation of organic matter, contributing to nutrient cycling in its habitat. This aligns with the ecological roles typically attributed to Flavobacteria, which are known for their capabilities in processing complex organic compounds in marine and freshwater ecosystems. Overall, the traits of Flavobacterium frigoris PS1 66_52 suggest its potential importance in maintaining ecosystem health and functioning, particularly in cold environments where it may play a crucial role in the degradation of organic materials and nutrient recycling.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium frigoris
StrainPS1 66_52

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium frigoris PS1 66_52
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium frigoris PS1 66_52


Gene Summary

Adenine Count

1276658 bp

Thymine Count

1305182 bp

Guanine Count

691670 bp

Cytosine Count

660591 bp

Genome Length

3934101 bp

Protein-coding Genes

3590 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
s1 rna binding proteinHJ01_03498Not AvailableNegative3836965 - 383781932869.9
leucine aminopeptidase-related proteinHJ01_03499Not AvailablePositive3838168 - 383952050516.0
hypothetical proteinHJ01_03500Not AvailableNegative3839589 - 383993012510.0
2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthaseHJ01_03501Not AvailableNegative3840099 - 384176061241.0
ribosomal-protein-s18p-alanine acetyltransferaseHJ01_03502Not AvailablePositive3841899 - 384239619200.2
glutathione peroxidase family proteinHJ01_03503Not AvailableNegative3842471 - 384305822005.4
outer membrane receptor protein, mostly fe transportHJ01_03504Not AvailableNegative3843206 - 384541982303.7
hypothetical proteinHJ01_03505Not AvailableNegative3845427 - 384672249377.6
hypothetical proteinHJ01_03506Not AvailableNegative3846813 - 384736419347.8
hypothetical proteinHJ01_03507Not AvailableNegative3847393 - 384804322524.8

Displaying genes 3551 – 3560 of 3641 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4 records
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da
BASm0014033AmmoniaH3NChemical structure of Ammonia7664-41-7
Average17.0305Da
Monoisotopic17.026549101Da
BASm0014071ChitinC24H41N3O16Chemical structure of Chitin1398-61-4
Average627.5928Da
Monoisotopic627.248682279Da
BASm0014072PectinC6H10O7Chemical structure of Pectin9000-69-5
Average194.1394Da
Monoisotopic194.042652674Da

Displaying 1–4 of 4 metabolites

Health Effects

No health effects information available for this bacterium.