Flavobacterium frigoris PS1 66_52

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium frigoris PS1 66_52 is characterized as a rod-shaped bacterium that possesses flagella, indicating its motility. This organism contains a single replicon, which suggests a streamlined genetic architecture that may facilitate efficient replication and adaptability in various environments. The genomic sequence of this strain is available under the accession number AHKF00000000.1, providing a basis for further genetic and functional studies. The presence of flagella in Flavobacterium frigoris PS1 66_52 highlights its potential ecological roles in aquatic environments, where motility can be advantageous for nutrient acquisition and colonization of surfaces. As a member of the Flavobacterium genus, it is likely to be involved in the degradation of organic matter, contributing to nutrient cycling in its habitat. This aligns with the ecological roles typically attributed to Flavobacteria, which are known for their capabilities in processing complex organic compounds in marine and freshwater ecosystems. Overall, the traits of Flavobacterium frigoris PS1 66_52 suggest its potential importance in maintaining ecosystem health and functioning, particularly in cold environments where it may play a crucial role in the degradation of organic materials and nutrient recycling.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium frigoris
StrainPS1 66_52

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium frigoris PS1 66_52
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium frigoris PS1 66_52


Gene Summary

Adenine Count

1276658 bp

Thymine Count

1305182 bp

Guanine Count

691670 bp

Cytosine Count

660591 bp

Genome Length

3934101 bp

Protein-coding Genes

3590 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinHJ01_01365Not AvailablePositive1479546 - 148034930143.1
co/zn/cd efflux system membrane fusion proteinHJ01_01366Not AvailablePositive1480398 - 148108725377.0
cobalt-zinc-cadmium resistance protein czcaHJ01_01367Not AvailablePositive1481191 - 148243245903.0
cobalt-zinc-cadmium resistance protein czcaHJ01_01368Not AvailablePositive1482442 - 148437971772.5
heavy metal rnd efflux outer membrane protein, czcc familyHJ01_01369Not AvailablePositive1484366 - 148561947679.0
putative co/zn/cd efflux system membrane fusion proteinHJ01_01370Not AvailablePositive1485646 - 148686945618.6
putative co/zn/cd efflux system membrane fusion proteinHJ01_01371Not AvailablePositive1486872 - 148808645123.3
membrane protein containing duf305HJ01_01372Not AvailablePositive1488406 - 148888818676.5
transcriptional regulator, arac familyHJ01_01373Not AvailablePositive1488914 - 148945320513.0
lead, cadmium, zinc and mercury transporting atpaseHJ01_01374Not AvailablePositive1489540 - 149225497971.3

Displaying genes 1391 – 1400 of 3641 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4 records
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da
BASm0014033AmmoniaH3NChemical structure of Ammonia7664-41-7
Average17.0305Da
Monoisotopic17.026549101Da
BASm0014071ChitinC24H41N3O16Chemical structure of Chitin1398-61-4
Average627.5928Da
Monoisotopic627.248682279Da
BASm0014072PectinC6H10O7Chemical structure of Pectin9000-69-5
Average194.1394Da
Monoisotopic194.042652674Da

Displaying 1–4 of 4 metabolites

Health Effects

No health effects information available for this bacterium.