Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides caccae |
| Strain | CL03T12C61 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1556091 bp
Thymine Count
1576357 bp
Guanine Count
1184702 bp
Cytosine Count
1161969 bp
Genome Length
5479119 bp
Protein-coding Genes
4577 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| valyl-trna synthetase | HMPREF1061_00658 | Not Available | Positive | 802481 - 805117 | 100618.0 |
| hypothetical protein | HMPREF1061_00659 | Not Available | Positive | 805234 - 807129 | 72414.3 |
| rna polymerase sigma-70 factor, expansion family 1 | HMPREF1061_00660 | Not Available | Negative | 807138 - 807713 | 22912.4 |
| hypothetical protein | HMPREF1061_00661 | Not Available | Positive | 807849 - 808865 | 39283.9 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1061_00662 | Not Available | Positive | 809117 - 812428 | 122102.0 |
| hypothetical protein | HMPREF1061_00663 | Not Available | Positive | 812441 - 813955 | 57436.4 |
| hypothetical protein | HMPREF1061_00664 | Not Available | Positive | 813970 - 815280 | 49118.9 |
| hypothetical protein | HMPREF1061_00665 | Not Available | Positive | 815309 - 816874 | 59331.1 |
| hypothetical protein | HMPREF1061_00666 | Not Available | Positive | 817120 - 819447 | 87827.0 |
| hypothetical protein | HMPREF1061_00667 | Not Available | Positive | 819517 - 821640 | 81092.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


