Bacteroides caccae

Gram-negativeAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides caccae is an obligate anaerobic, Gram-negative, rod-shaped bacterium belonging to the Bacteroidetes phylum. It is categorized as a chemoheterotroph, deriving its energy from the breakdown of organic compounds, specifically carbohydrates and proteins, in an anaerobic environment. This microbe thrives in a temperature range suitable for mesophiles, typically around 30-37°C, which aligns with the human body temperature, indicating its adaptation to the human gut environment. The shape of Bacteroides caccae is bacillus, or rod-shaped, which is characteristic of many bacteria in its genus. It is primarily found in the gastrointestinal tract of humans, where it plays a crucial role in the digestion of complex polysaccharides and the production of short-chain fatty acids, which are beneficial for gut health. Besides the gut, it can also be found in other body sites, including the oral cavity and the female genital tract, reflecting its versatility and adaptability to different environments within the human body. As a key member of the gut microbiota, Bacteroides caccae contributes to the maintenance of gut homeostasis and immune function. It participates in the fermentation of dietary fibers, producing metabolites that can influence host metabolism and immune responses. Additionally, this bacterium has been the subject of research concerning its potential role in health and disease, with emerging evidence suggesting that imbalances in its abundance may be linked to conditions such as obesity, inflammatory bowel disease, and other metabolic disorders. Its ability to metabolize diverse substrates underscores the importance of maintaining a balanced gut microbiome for overall health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides caccae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides caccae

Accession NumberQSDW00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4031 genes

Non-Coding Genes

100 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
16s ribosomal rnaNot AvailableNot Available+175 - 1710Not Available
ragb/susd family nutrient uptake outer membrane proteinDWZ35_00005Not Available-86 - 203575642.3
23s ribosomal rnaNot AvailableNot Available+2204 - 5082Not Available
5s ribosomal rnaNot AvailableNot Available+5158 - 5268Not Available
susc/raga family tonb-linked outer membrane proteinDWZ35_00010Not Available-2053 - 5469127783.0
fecr family proteinDWZ35_00015Not Available-5607 - 669241173.4
sigma-70 family rna polymerase sigma factorDWZ35_00020Not Available-6754 - 739525266.5
alkaline phosphataseDWZ35_00025Not Available-7597 - 849633267.8
Ncrna_class:rnase_p_rnaNot AvailableNot Available+8708 - 9071Not Available
carbohydrate-binding proteinDWZ35_00030Not Available-8569 - 1114298018.2

Displaying genes 1 – 10 of 8277 in total

Pathways

22 pathways

Metabolites

87 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00055001-octadecanoyl-sn-glycero-3-phosphateC21H41O7PChemical structure of 1-octadecanoyl-sn-glycero-3-phosphateNot available
Average436.5198Da
Monoisotopic436.2589902Da
BASm0012554N-acetyl-beta-D-glucosaminyl-(1->4)-1,6-anhydro-N-acetyl-beta-D-muramoyl-L-alanyl-gamma-D-glutamyl-meso-diaminoheptanedioate-D-alanineC37H57N7O20Not availableNot available
Average919.893Da
Monoisotopic919.366934423Da
BASm0014032Acetic acidC2H4O2Chemical structure of Acetic acid64-19-7
Average60.052Da
Monoisotopic60.021129372Da
BASm0014033AmmoniaH3NChemical structure of Ammonia7664-41-7
Average17.0305Da
Monoisotopic17.026549101Da
BASm0014041Oleic acidC18H34O2Chemical structure of Oleic acid112-80-1
Average282.4614Da
Monoisotopic282.255880332Da
BASm0014058Myristic acidC14H28O2Chemical structure of Myristic acid544-63-8
Average228.3709Da
Monoisotopic228.20893014Da
BASm0014182Vaccenic acidC18H34O2Chemical structure of Vaccenic acidNULL
Average282.468Da
Monoisotopic282.255880335Da
BASm0014219Palmitoleic acidC16H30O2Chemical structure of Palmitoleic acidNULL
Average254.4082Da
Monoisotopic254.224580204Da
BASm0014222DiethanolamineC4H11NO2Chemical structure of DiethanolamineNULL
Average105.1356Da
Monoisotopic105.078978601Da

Displaying 1–10 of 87 metabolites