Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides caccae |
| Strain | CL03T12C61 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1556091 bp
Thymine Count
1576357 bp
Guanine Count
1184702 bp
Cytosine Count
1161969 bp
Genome Length
5479119 bp
Protein-coding Genes
4577 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1061_00430 | Not Available | Positive | 531109 - 533979 | 107146.0 |
| rna polymerase sigma-70 factor, expansion family 1 | HMPREF1061_00431 | Not Available | Positive | 534079 - 534705 | 24998.6 |
| glycosyl hydrolase family 109 protein 2 | HMPREF1061_00432 | Not Available | Negative | 534677 - 535930 | 47031.6 |
| Trna-gly | Not Available | Not Available | Positive | 535993 - 536065 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 536071 - 536156 | Not Available |
| 6,7-dimethyl-8-ribityllumazine synthase | HMPREF1061_00433 | Not Available | Negative | 536206 - 536700 | 17674.2 |
| hypothetical protein | HMPREF1061_00434 | Not Available | Negative | 536850 - 537533 | 24945.8 |
| dna replication and repair protein recf | HMPREF1061_00435 | Not Available | Positive | 537695 - 538804 | 42752.4 |
| hypothetical protein | HMPREF1061_00436 | Not Available | Positive | 538801 - 539088 | 10922.4 |
| histidinol phosphate phosphatase hisj family protein | HMPREF1061_00437 | Not Available | Negative | 539075 - 539866 | 31115.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


