Bacteroides caccae CL03T12C61

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides caccae CL03T12C61 is a Gram-negative, anaerobic bacterium that belongs to the Bacteroides genus. This organism is rod-shaped and possesses flagella, which may facilitate its motility within the gut environment. Bacteroides caccae CL03T12C61 is associated with the gut of Homo sapiens, indicating its role in the human microbiome. This species is characterized by having a single replicon, which is typical for many bacterial species, contributing to its genetic stability and replication process. The presence of flagella suggests that Bacteroides caccae CL03T12C61 may play an active role in navigating the complex gut environment, potentially influencing its interactions with other microbial species and the host. Understanding the traits of Bacteroides caccae CL03T12C61 provides insights into its ecological role in the human gut. As a member of the gut microbiota, it likely contributes to various metabolic processes and may participate in the degradation of complex carbohydrates, which can influence nutrient availability for the host. The presence of anaerobic bacteria like Bacteroides caccae CL03T12C61 is essential for maintaining a balanced gut ecosystem, where they can help in fermentation processes and the production of short-chain fatty acids, which are beneficial for host health. Thus, Bacteroides caccae CL03T12C61 exemplifies the complex interdependencies within the human gut microbiome.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides caccae
StrainCL03T12C61

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Bacteroides caccae CL03T12C61
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides caccae CL03T12C61 cont1.27, whole genome shotgun

Gene Summary

Adenine Count

1556091 bp

Thymine Count

1576357 bp

Guanine Count

1184702 bp

Cytosine Count

1161969 bp

Genome Length

5479119 bp

Protein-coding Genes

4577 genes

Non-Coding Genes

98 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinHMPREF1061_03586Not AvailableNegative4258442 - 425926031175.0
sigma-70 family rna polymerase sigma factorHMPREF1061_03587Not AvailablePositive4259521 - 426002419931.8
protein mrazHMPREF1061_03588Not AvailablePositive4260376 - 426084618370.0
ribosomal rna small subunit methyltransferase hHMPREF1061_03589Not AvailablePositive4260833 - 426174734797.6
hypothetical proteinHMPREF1061_03590Not AvailablePositive4261759 - 426211213763.7
hypothetical proteinHMPREF1061_03591Not AvailablePositive4262185 - 426431478273.4
udp-n-acetylmuramoyl-l-alanyl-d-glutamate-2, 6-diaminopimelate ligaseHMPREF1061_03592Not AvailablePositive4264345 - 426579352884.7
phospho-n-acetylmuramoyl-pentapeptide- transferaseHMPREF1061_03593Not AvailablePositive4265896 - 426716446800.5
udp-n-acetylmuramoylalanine-d-glutamate ligaseHMPREF1061_03594Not AvailablePositive4267313 - 426864749417.9
hypothetical proteinHMPREF1061_03595Not AvailablePositive4268695 - 427001448147.9

Displaying genes 3661 – 3670 of 4675 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.