Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides caccae |
| Strain | CL03T12C61 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1556091 bp
Thymine Count
1576357 bp
Guanine Count
1184702 bp
Cytosine Count
1161969 bp
Genome Length
5479119 bp
Protein-coding Genes
4577 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylornithine carbamoyltransferase | HMPREF1061_03467 | Not Available | Positive | 4102660 - 4103613 | 36312.7 |
| hypothetical protein | HMPREF1061_03468 | Not Available | Positive | 4103645 - 4104322 | 26165.6 |
| hypothetical protein | HMPREF1061_03469 | Not Available | Negative | 4104439 - 4104834 | 14913.8 |
| hypothetical protein | HMPREF1061_03470 | Not Available | Negative | 4104845 - 4105552 | 26361.1 |
| hypothetical protein | HMPREF1061_03471 | Not Available | Negative | 4105549 - 4106697 | 44211.3 |
| d-alanine-d-alanine ligase | HMPREF1061_03472 | Not Available | Negative | 4106706 - 4107680 | 35990.2 |
| rlua family pseudouridine synthase | HMPREF1061_03473 | Not Available | Negative | 4107677 - 4108750 | 40852.0 |
| hypothetical protein | HMPREF1061_03474 | Not Available | Negative | 4108777 - 4109427 | 23814.7 |
| 50s ribosomal protein l34 | HMPREF1061_03475 | Not Available | Negative | 4109801 - 4109962 | 6303.66 |
| elongation factor p | HMPREF1061_03476 | Not Available | Positive | 4110156 - 4110722 | 21299.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


