Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides caccae |
| Strain | CL03T12C61 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1556091 bp
Thymine Count
1576357 bp
Guanine Count
1184702 bp
Cytosine Count
1161969 bp
Genome Length
5479119 bp
Protein-coding Genes
4577 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1061_01899 | Not Available | Positive | 2200048 - 2200212 | 6670.96 |
| hypothetical protein | HMPREF1061_01900 | Not Available | Positive | 2200477 - 2200722 | 9129.89 |
| succinate-coa ligase, alpha subunit | HMPREF1061_01901 | Not Available | Negative | 2200782 - 2201750 | 33932.8 |
| succinyl-coa ligase | HMPREF1061_01902 | Not Available | Negative | 2201786 - 2202916 | 41312.5 |
| malonyl coa-acyl carrier protein transacylase | HMPREF1061_01903 | Not Available | Negative | 2203109 - 2203996 | 31258.8 |
| phosphomethylpyrimidine kinase | HMPREF1061_01904 | Not Available | Negative | 2204047 - 2204883 | 30237.6 |
| hypothetical protein | HMPREF1061_01905 | Not Available | Positive | 2205225 - 2205956 | 28468.7 |
| hypothetical protein | HMPREF1061_01906 | Not Available | Positive | 2206022 - 2207542 | 55004.8 |
| xylose isomerase | HMPREF1061_01907 | Not Available | Positive | 2207576 - 2208892 | 49000.9 |
| sugar porter (sp) family mfs transporter | HMPREF1061_01908 | Not Available | Positive | 2208986 - 2210440 | 53066.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


