Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides caccae |
| Strain | CL03T12C61 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1556091 bp
Thymine Count
1576357 bp
Guanine Count
1184702 bp
Cytosine Count
1161969 bp
Genome Length
5479119 bp
Protein-coding Genes
4577 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome biogenesis gtp-binding protein ysxc | HMPREF1061_01447 | Not Available | Negative | 1719702 - 1720307 | 23145.0 |
| hypothetical protein | HMPREF1061_01448 | Not Available | Negative | 1720432 - 1721886 | 54449.1 |
| recombination protein recr | HMPREF1061_01449 | Not Available | Positive | 1721977 - 1722594 | 22540.4 |
| hypothetical protein | HMPREF1061_01450 | Not Available | Positive | 1722624 - 1723073 | 16763.1 |
| hypothetical protein | HMPREF1061_01451 | Not Available | Positive | 1723080 - 1723625 | 20807.2 |
| upf0301 protein | HMPREF1061_01452 | Not Available | Negative | 1723684 - 1724307 | 24027.1 |
| hypothetical protein | HMPREF1061_01453 | Not Available | Negative | 1724369 - 1725685 | 48721.4 |
| Trna-asp | Not Available | Not Available | Positive | 1725837 - 1725913 | Not Available |
| 3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 1 | HMPREF1061_01454 | Not Available | Negative | 1726278 - 1727282 | 36919.4 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | HMPREF1061_01455 | Not Available | Positive | 1727624 - 1728670 | 39299.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


