Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | VA-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1149492 bp
Thymine Count
1150111 bp
Guanine Count
1190737 bp
Cytosine Count
1188777 bp
Genome Length
4679117 bp
Protein-coding Genes
4808 genes
Non-Coding Genes
429 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-amylase | SFVA6_5020 | Not Available | Negative | 4541460 - 4542974 | 56702.2 |
| protein bax | SFVA6_5021 | Not Available | Positive | 4543546 - 4544118 | 21501.8 |
| xylose operon regulatory protein domain protein | SFVA6_5022 | Not Available | Negative | 4544226 - 4544762 | 20420.8 |
| xylose operon regulatory protein domain protein | SFVA6_5023 | Not Available | Negative | 4544874 - 4545404 | 20292.7 |
| branched-chain amino acid transport system / permease component family protein | SFVA6_5024 | Not Available | Negative | 4545482 - 4546663 | 41033.5 |
| d-xylose abc transporter, atp-binding protein | SFVA6_5025 | Not Available | Negative | 4546641 - 4548182 | 56503.9 |
| d-xylose abc transporter, d-xylose-binding protein | SFVA6_5026 | Not Available | Negative | 4548260 - 4549252 | 35791.2 |
| xylose isomerase domain protein | SFVA6_5027 | Not Available | Positive | 4549618 - 4550295 | 25725.4 |
| xylose isomerase domain protein | SFVA6_5028 | Not Available | Positive | 4550302 - 4550940 | 23760.1 |
| xylulokinase | SFVA6_5029 | Not Available | Positive | 4551012 - 4552364 | 49320.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





