Paraprevotella clara YIT 11840

ovoid

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Prevotellaceae

Genus

Paraprevotella

Description

Paraprevotella clara YIT 11840 is a Gram-negative bacterium characterized by its ovoid shape. It possesses a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in various environments. The strain has been cataloged with the accession number AFFY00000000.1, which serves as a reference for further studies and identification. The Gram-negative classification of Paraprevotella clara YIT 11840 suggests that it possesses an outer membrane containing lipopolysaccharides, a feature that can influence its interactions with other microorganisms and its survival in diverse habitats. The ovoid morphology may also play a role in its ecological niche, potentially affecting its motility and colonization abilities in biological systems. Understanding the traits of Paraprevotella clara YIT 11840 is crucial for elucidating its ecological role and potential applications in biotechnology. Its Gram-negative nature and unique shape may allow it to thrive in microbiomes, where it could participate in various biochemical processes, including nutrient cycling and symbiotic relationships within host organisms. Further research could reveal its specific functions within these ecosystems, contributing to our overall understanding of microbial diversity and functionality.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPrevotellaceae
GenusParaprevotella
SpeciesParaprevotella clara
StrainYIT 11840

Profile

Physiology
Gram staining propertiesNegative
Shapeovoid
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paraprevotella clara YIT 11840 P_claraYIT11840-1.0_Cont1658.2,

Gene Summary

Adenine Count

1109390 bp

Thymine Count

1085433 bp

Guanine Count

991239 bp

Cytosine Count

1047483 bp

Genome Length

4233545 bp

Protein-coding Genes

4010 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinHMPREF9441_02978Not AvailableNegative3228172 - 322923339343.8
3-methyl-2-oxobutanoate hydroxymethyltransferaseHMPREF9441_02979Q5LD96Negative3229330 - 323015129374.7
had hydrolase, family ia, variant 3HMPREF9441_02980Q08623Negative3230202 - 323086125058.7
hypothetical proteinHMPREF9441_02981Not AvailableNegative3231156 - 32313688020.7
amp-binding enzymeHMPREF9441_02982Q8XDR6Positive3231433 - 323309462691.2
uvrd/rep helicaseHMPREF9441_02983B2IPX3Positive3233100 - 3236348125210.0
hypothetical proteinHMPREF9441_02984Not AvailablePositive3236363 - 3239176108445.0
Trna-argNot AvailableNot AvailablePositive3239251 - 3239325Not Available
hypothetical proteinHMPREF9441_02986Not AvailablePositive3239350 - 32395988726.42
hypothetical proteinHMPREF9441_02987Q58221Negative3239861 - 324127054537.4

Displaying genes 2981 – 2990 of 4077 in total

Metabolites

631 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000315acetylpyruvateC5H6O4Chemical structure of acetylpyruvateNot available
Average130.099Da
Monoisotopic130.0266087Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da

Displaying 1–10 of 631 metabolites

Health Effects

No health effects information available for this bacterium.