Paraprevotella clara YIT 11840

ovoid

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Prevotellaceae

Genus

Paraprevotella

Description

Paraprevotella clara YIT 11840 is a Gram-negative bacterium characterized by its ovoid shape. It possesses a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in various environments. The strain has been cataloged with the accession number AFFY00000000.1, which serves as a reference for further studies and identification. The Gram-negative classification of Paraprevotella clara YIT 11840 suggests that it possesses an outer membrane containing lipopolysaccharides, a feature that can influence its interactions with other microorganisms and its survival in diverse habitats. The ovoid morphology may also play a role in its ecological niche, potentially affecting its motility and colonization abilities in biological systems. Understanding the traits of Paraprevotella clara YIT 11840 is crucial for elucidating its ecological role and potential applications in biotechnology. Its Gram-negative nature and unique shape may allow it to thrive in microbiomes, where it could participate in various biochemical processes, including nutrient cycling and symbiotic relationships within host organisms. Further research could reveal its specific functions within these ecosystems, contributing to our overall understanding of microbial diversity and functionality.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPrevotellaceae
GenusParaprevotella
SpeciesParaprevotella clara
StrainYIT 11840

Profile

Physiology
Gram staining propertiesNegative
Shapeovoid
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paraprevotella clara YIT 11840 P_claraYIT11840-1.0_Cont1658.2,

Gene Summary

Adenine Count

1109390 bp

Thymine Count

1085433 bp

Guanine Count

991239 bp

Cytosine Count

1047483 bp

Genome Length

4233545 bp

Protein-coding Genes

4010 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinHMPREF9441_02708Not AvailableNegative2909380 - 29095024776.03
glycosyl hydrolase family 2, sugar binding domain proteinHMPREF9441_02709T2KN75Positive2909534 - 2912473110521.0
peptidase dimerization domain proteinHMPREF9441_02710Q5AKA5Positive2912588 - 291398551981.2
hypothetical proteinHMPREF9441_02711P24423Negative2914179 - 291465318853.5
hypothetical proteinHMPREF9441_02712Not AvailableNegative2914717 - 291512415693.8
transcription termination/antitermination factor nusgHMPREF9441_02713Not AvailableNegative2915152 - 291570621264.0
hypothetical proteinHMPREF9441_02714Not AvailablePositive2915951 - 29160765245.59
hypothetical proteinHMPREF9441_02715Not AvailableNegative2916124 - 29162916482.89
hypothetical proteinHMPREF9441_02716Not AvailablePositive2916326 - 291665212429.9
putative radical sam protein ygiqHMPREF9441_02717Q8AB57Positive2916670 - 291881482134.9

Displaying genes 2711 – 2720 of 4077 in total

Metabolites

631 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000315acetylpyruvateC5H6O4Chemical structure of acetylpyruvateNot available
Average130.099Da
Monoisotopic130.0266087Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da

Displaying 1–10 of 631 metabolites

Health Effects

No health effects information available for this bacterium.