Paraprevotella clara YIT 11840

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Prevotellaceae

Genus

Paraprevotella

Description

Paraprevotella clara YIT 11840 is a Gram-negative bacterium characterized by its distinctive cell wall structure, which lacks the thick peptidoglycan layer typical of Gram-positive organisms. This trait may confer advantages in certain environments, such as increased resistance to antibiotics that target cell wall synthesis. While specific metabolic capabilities and ecological roles of Paraprevotella clara YIT 11840 are not detailed in the available data, its classification within the Paraprevotella genus suggests it may be involved in the fermentation of complex carbohydrates, potentially contributing to the breakdown of dietary fibers in anaerobic environments such as the intestines of mammals. The presence of Paraprevotella clara YIT 11840 in the gut microbiota may indicate its role in maintaining gut health, influencing host metabolism, or modulating immune responses, though further studies would be necessary to elucidate these interactions. The unique Gram-negative nature of this bacterium may also indicate specific ecological niches within microbial communities where it can thrive, potentially participating in symbiotic relationships with other gut microbes. Understanding the functional contributions of Paraprevotella clara YIT 11840 could provide insights into the complex dynamics of gut microbiomes and their impacts on host health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPrevotellaceae
GenusParaprevotella
SpeciesParaprevotella clara
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paraprevotella clara YIT 11840

Accession NumberAFFY00000000.1

Gene Summary

Adenine Count

1109390 bp

Thymine Count

1085433 bp

Guanine Count

991239 bp

Cytosine Count

1047483 bp

Genome Length

4233545 bp

Protein-coding Genes

4010 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
23s ribosomal rnaNot AvailableNot Available+1 - 2658Not Available
23s ribosomal rnaNot AvailableNot Available+2 - 2170Not Available
16s ribosomal rnaNot AvailableNot Available+307 - 1806Not Available
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseHMPREF9441_00001P11880-117 - 141547920.3
dihydropteroate synthaseHMPREF9441_00002P0AC14+1580 - 243131904.6
tigr00159 family proteinHMPREF9441_00003Q45589+2444 - 321729336.6
hypothetical proteinHMPREF9441_00004Not Available-3218 - 507470695.7
phosphate acetyltransferaseHMPREF9441_00005Q59330+5357 - 637035569.3
acetate kinaseHMPREF9441_00006A6KXS0+6404 - 759742852.9
hypothetical proteinHMPREF9441_00007Not Available+7638 - 78448329.12

Displaying genes 1 – 10 of 4077 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

509 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000315acetylpyruvateC5H6O4Chemical structure of acetylpyruvateNot available
Average130.099Da
Monoisotopic130.0266087Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da

Displaying 1–10 of 509 metabolites