Candidatus Nitrosarchaeum limnium SFB1

Kingdom

Thermoproteati

Phylum

Nitrososphaerota

Class

Nitrososphaeria

Order

Nitrosopumilales

Family

Nitrosopumilaceae

Genus

Nitrosarchaeum

Description

Candidatus Nitrosarchaeum limnium SFB1 is characterized by possessing two replicons, which may contribute to its genetic diversity and adaptability in varied environments. The organism has been cataloged under two specific accessions: AEGP00000000.1 and NZ_CM001158.1, which provide a basis for genomic studies and further exploration of its biological functions. As a member of the archaeal domain, Candidatus Nitrosarchaeum limnium SFB1 is likely involved in important biogeochemical processes, particularly in nitrogen cycling. While specific metabolic pathways and ecological roles are not detailed in the provided information, the presence of such organisms often indicates a role in ammonia oxidation, which is crucial for maintaining nitrogen balance in various ecosystems. The identification of Candidatus Nitrosarchaeum limnium SFB1 adds to our understanding of microbial diversity and the functional roles of archaea in the environment. Its genomic characteristics, including the number of replicons, suggest potential mechanisms for adaptability and resilience in fluctuating environmental conditions. This adaptability may allow it to thrive in specific niches, contributing to nutrient cycling and ecosystem dynamics. Overall, the study of Candidatus Nitrosarchaeum limnium SFB1 underscores the importance of archaeal microorganisms in ecological processes, particularly in aquatic environments where nitrogen compounds are prevalent.

Taxonomy

KingdomThermoproteati
PhylumNitrososphaerota
ClassNitrososphaeria
OrderNitrosopumilales
FamilyNitrosopumilaceae
GenusNitrosarchaeum
SpeciesCandidatus Nitrosarchaeum limnium
StrainSFB1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Nitrosarchaeum limnium SFB1 Nlim_contig76, whole genome

Gene Summary

Adenine Count

591219 bp

Thymine Count

586134 bp

Guanine Count

283745 bp

Cytosine Count

282137 bp

Genome Length

1743235 bp

Protein-coding Genes

2038 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc-type transport system involved in fe-s cluster assembly, atpase componentNlim_0068Not AvailableNegative53949 - 5431713418.0
zinc finger tfiib-type domain-containing proteinNlim_0069Not AvailableNegative54418 - 5537435061.6
hypothetical proteinNlim_0070Not AvailableNegative55371 - 556168983.12
signal recognition particle, subunit srp19 (srp19)Nlim_0071Not AvailableNegative55712 - 5601111636.2
30s ribosomal protein s8eNlim_0072Not AvailableNegative56016 - 5639613890.0
chromosome segregation and condensation protein scpbNlim_0073Not AvailableNegative56461 - 5703921883.5
chromosome segregation and condensation protein scpaNlim_0074Not AvailableNegative57094 - 5776825573.3
alcohol dehydrogenaseNlim_0075Not AvailablePositive57863 - 5891537316.3
hypothetical proteinNlim_0076Not AvailablePositive58992 - 5971727126.0
hypothetical proteinNlim_0077Not AvailablePositive59866 - 6051624920.2

Displaying genes 61 – 70 of 4085 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.