Candidatus Nitrosarchaeum limnium SFB1

Kingdom

Thermoproteati

Phylum

Nitrososphaerota

Class

Nitrososphaeria

Order

Nitrosopumilales

Family

Nitrosopumilaceae

Genus

Nitrosarchaeum

Description

Candidatus Nitrosarchaeum limnium SFB1 is characterized by possessing two replicons, which may contribute to its genetic diversity and adaptability in varied environments. The organism has been cataloged under two specific accessions: AEGP00000000.1 and NZ_CM001158.1, which provide a basis for genomic studies and further exploration of its biological functions. As a member of the archaeal domain, Candidatus Nitrosarchaeum limnium SFB1 is likely involved in important biogeochemical processes, particularly in nitrogen cycling. While specific metabolic pathways and ecological roles are not detailed in the provided information, the presence of such organisms often indicates a role in ammonia oxidation, which is crucial for maintaining nitrogen balance in various ecosystems. The identification of Candidatus Nitrosarchaeum limnium SFB1 adds to our understanding of microbial diversity and the functional roles of archaea in the environment. Its genomic characteristics, including the number of replicons, suggest potential mechanisms for adaptability and resilience in fluctuating environmental conditions. This adaptability may allow it to thrive in specific niches, contributing to nutrient cycling and ecosystem dynamics. Overall, the study of Candidatus Nitrosarchaeum limnium SFB1 underscores the importance of archaeal microorganisms in ecological processes, particularly in aquatic environments where nitrogen compounds are prevalent.

Taxonomy

KingdomThermoproteati
PhylumNitrososphaerota
ClassNitrososphaeria
OrderNitrosopumilales
FamilyNitrosopumilaceae
GenusNitrosarchaeum
SpeciesCandidatus Nitrosarchaeum limnium
StrainSFB1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Nitrosarchaeum limnium SFB1 Nlim_contig76, whole genome

Gene Summary

Adenine Count

591219 bp

Thymine Count

586134 bp

Guanine Count

283745 bp

Cytosine Count

282137 bp

Genome Length

1743235 bp

Protein-coding Genes

2038 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
translation initiation factor if-2 subunit alphaNLIM_RS10205Not AvailablePositive1748868 - 174966530141.6
stt3 domain-containing proteinNLIM_RS10210Not AvailableNegative1749828 - 175196679204.7
ybhb/ybcl family raf kinase inhibitor-like proteinNLIM_RS10215Not AvailableNegative1752067 - 175252216669.0
twitching motility protein piltNLIM_RS10220Not AvailableNegative1752558 - 175292613912.3
translation initiation factor if-2 subunit gammaNLIM_RS10225Not AvailableNegative1752919 - 175418145213.8
s6e family ribosomal proteinNLIM_RS10230Not AvailableNegative1754222 - 175460513558.3
hypothetical proteinNLIM_RS10235Not AvailableNegative1754800 - 17549736645.94
Trna-glyNot AvailableNot AvailablePositive1755027 - 1755100Not Available
tetratricopeptide repeat proteinNLIM_RS10245Not AvailableNegative1755102 - 175606136365.5
glutamine amidotransferase-related proteinNLIM_RS10250Not AvailableNegative1756097 - 175663920431.9

Displaying genes 4061 – 4070 of 4085 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.