Candidatus Nitrosarchaeum limnium SFB1

Kingdom

Thermoproteati

Phylum

Nitrososphaerota

Class

Nitrososphaeria

Order

Nitrosopumilales

Family

Nitrosopumilaceae

Genus

Nitrosarchaeum

Description

Candidatus Nitrosarchaeum limnium SFB1 is characterized by possessing two replicons, which may contribute to its genetic diversity and adaptability in varied environments. The organism has been cataloged under two specific accessions: AEGP00000000.1 and NZ_CM001158.1, which provide a basis for genomic studies and further exploration of its biological functions. As a member of the archaeal domain, Candidatus Nitrosarchaeum limnium SFB1 is likely involved in important biogeochemical processes, particularly in nitrogen cycling. While specific metabolic pathways and ecological roles are not detailed in the provided information, the presence of such organisms often indicates a role in ammonia oxidation, which is crucial for maintaining nitrogen balance in various ecosystems. The identification of Candidatus Nitrosarchaeum limnium SFB1 adds to our understanding of microbial diversity and the functional roles of archaea in the environment. Its genomic characteristics, including the number of replicons, suggest potential mechanisms for adaptability and resilience in fluctuating environmental conditions. This adaptability may allow it to thrive in specific niches, contributing to nutrient cycling and ecosystem dynamics. Overall, the study of Candidatus Nitrosarchaeum limnium SFB1 underscores the importance of archaeal microorganisms in ecological processes, particularly in aquatic environments where nitrogen compounds are prevalent.

Taxonomy

KingdomThermoproteati
PhylumNitrososphaerota
ClassNitrososphaeria
OrderNitrosopumilales
FamilyNitrosopumilaceae
GenusNitrosarchaeum
SpeciesCandidatus Nitrosarchaeum limnium
StrainSFB1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Nitrosarchaeum limnium SFB1 Nlim_contig76, whole genome

Gene Summary

Adenine Count

591219 bp

Thymine Count

586134 bp

Guanine Count

283745 bp

Cytosine Count

282137 bp

Genome Length

1743235 bp

Protein-coding Genes

2038 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
exosome complex rna-binding protein rrp4NLIM_RS08175Not AvailableNegative1390403 - 139108324640.9
ribosome assembly factor sbdsNLIM_RS08180Not AvailableNegative1391083 - 139176925583.0
hypothetical proteinNLIM_RS08185Not AvailablePositive1391923 - 13921508405.39
hypothetical proteinNLIM_RS08190Not AvailablePositive1392185 - 139246911202.7
duf6659 family proteinNLIM_RS08195Not AvailablePositive1392778 - 139317314996.3
dna-directed rna polymerase subunit dNLIM_RS08200Not AvailablePositive1393787 - 139442523338.9
50s ribosomal protein l18eNLIM_RS08205Not AvailablePositive1394495 - 139481811370.0
50s ribosomal protein l13NLIM_RS08210Not AvailablePositive1394811 - 139527217253.4
30s ribosomal protein s9NLIM_RS08215Not AvailablePositive1395269 - 139571816821.4
sugar phosphate nucleotidyltransferaseNLIM_RS08220Not AvailablePositive1395722 - 139645027487.5

Displaying genes 3671 – 3680 of 4085 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.