Candidatus Nitrosarchaeum limnium SFB1

Kingdom

Thermoproteati

Phylum

Nitrososphaerota

Class

Nitrososphaeria

Order

Nitrosopumilales

Family

Nitrosopumilaceae

Genus

Nitrosarchaeum

Description

Candidatus Nitrosarchaeum limnium SFB1 is characterized by possessing two replicons, which may contribute to its genetic diversity and adaptability in varied environments. The organism has been cataloged under two specific accessions: AEGP00000000.1 and NZ_CM001158.1, which provide a basis for genomic studies and further exploration of its biological functions. As a member of the archaeal domain, Candidatus Nitrosarchaeum limnium SFB1 is likely involved in important biogeochemical processes, particularly in nitrogen cycling. While specific metabolic pathways and ecological roles are not detailed in the provided information, the presence of such organisms often indicates a role in ammonia oxidation, which is crucial for maintaining nitrogen balance in various ecosystems. The identification of Candidatus Nitrosarchaeum limnium SFB1 adds to our understanding of microbial diversity and the functional roles of archaea in the environment. Its genomic characteristics, including the number of replicons, suggest potential mechanisms for adaptability and resilience in fluctuating environmental conditions. This adaptability may allow it to thrive in specific niches, contributing to nutrient cycling and ecosystem dynamics. Overall, the study of Candidatus Nitrosarchaeum limnium SFB1 underscores the importance of archaeal microorganisms in ecological processes, particularly in aquatic environments where nitrogen compounds are prevalent.

Taxonomy

KingdomThermoproteati
PhylumNitrososphaerota
ClassNitrososphaeria
OrderNitrosopumilales
FamilyNitrosopumilaceae
GenusNitrosarchaeum
SpeciesCandidatus Nitrosarchaeum limnium
StrainSFB1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Nitrosarchaeum limnium SFB1 Nlim_contig76, whole genome

Gene Summary

Adenine Count

591219 bp

Thymine Count

586134 bp

Guanine Count

283745 bp

Cytosine Count

282137 bp

Genome Length

1743235 bp

Protein-coding Genes

2038 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinNLIM_RS07190Not AvailablePositive1234067 - 123454918510.3
m24 family metallopeptidaseNLIM_RS07195Not AvailableNegative1234551 - 123561539716.4
duf814 domain-containing proteinNLIM_RS07200Not AvailablePositive1235683 - 123669637539.5
cell division protein sepfNLIM_RS07205Not AvailablePositive1236770 - 123704810613.1
beta-casp ribonuclease acpsf1NLIM_RS07210Not AvailableNegative1237040 - 123897772571.8
archaeal proteasome endopeptidase complex subunit betaNLIM_RS07215Not AvailableNegative1238985 - 123961722779.4
sn-glycerol-1-phosphate dehydrogenaseNLIM_RS07220Not AvailablePositive1239729 - 124075736746.0
peptidylprolyl isomeraseNLIM_RS07225Not AvailableNegative1240759 - 124150527957.6
aminotransferase class v-fold plp-dependent enzymeNLIM_RS07230Not AvailableNegative1241548 - 124269341923.8
nicotinamide-nucleotide adenylyltransferaseNLIM_RS07235Not AvailableNegative1242736 - 124323018947.1

Displaying genes 3481 – 3490 of 4085 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.