Candidatus Nitrosarchaeum limnium SFB1

Kingdom

Thermoproteati

Phylum

Nitrososphaerota

Class

Nitrososphaeria

Order

Nitrosopumilales

Family

Nitrosopumilaceae

Genus

Nitrosarchaeum

Description

Candidatus Nitrosarchaeum limnium SFB1 is characterized by possessing two replicons, which may contribute to its genetic diversity and adaptability in varied environments. The organism has been cataloged under two specific accessions: AEGP00000000.1 and NZ_CM001158.1, which provide a basis for genomic studies and further exploration of its biological functions. As a member of the archaeal domain, Candidatus Nitrosarchaeum limnium SFB1 is likely involved in important biogeochemical processes, particularly in nitrogen cycling. While specific metabolic pathways and ecological roles are not detailed in the provided information, the presence of such organisms often indicates a role in ammonia oxidation, which is crucial for maintaining nitrogen balance in various ecosystems. The identification of Candidatus Nitrosarchaeum limnium SFB1 adds to our understanding of microbial diversity and the functional roles of archaea in the environment. Its genomic characteristics, including the number of replicons, suggest potential mechanisms for adaptability and resilience in fluctuating environmental conditions. This adaptability may allow it to thrive in specific niches, contributing to nutrient cycling and ecosystem dynamics. Overall, the study of Candidatus Nitrosarchaeum limnium SFB1 underscores the importance of archaeal microorganisms in ecological processes, particularly in aquatic environments where nitrogen compounds are prevalent.

Taxonomy

KingdomThermoproteati
PhylumNitrososphaerota
ClassNitrososphaeria
OrderNitrosopumilales
FamilyNitrosopumilaceae
GenusNitrosarchaeum
SpeciesCandidatus Nitrosarchaeum limnium
StrainSFB1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Nitrosarchaeum limnium SFB1 Nlim_contig76, whole genome

Gene Summary

Adenine Count

591219 bp

Thymine Count

586134 bp

Guanine Count

283745 bp

Cytosine Count

282137 bp

Genome Length

1743235 bp

Protein-coding Genes

2038 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
universal stress protein uspa and related nucleotide-binding proteinNlim_1552Not AvailableNegative1297236 - 129770317258.4
uspa domain-containing proteinNlim_1553Not AvailableNegative1297712 - 129814015796.9
universal stress protein uspa and related nucleotide-binding proteinNlim_1554Not AvailablePositive1298307 - 129874716349.7
inosine-5-monophosphate dehydrogenase, cystathionine beta-synthaseNlim_1555Not AvailableNegative1298749 - 129931820810.9
hypothetical proteinNlim_1556Not AvailableNegative1299363 - 12996119125.48
hypothetical proteinNlim_1557Not AvailablePositive1299736 - 130090243838.8
archaeal enzymes of atp-grasp superfamilyNlim_1558Not AvailablePositive1300905 - 130163027476.8
putative small heat shock proteinNlim_1559Not AvailablePositive1301635 - 130203015144.2
hypothetical proteinNlim_1560Not AvailableNegative1302031 - 130230310423.6
hypothetical proteinNlim_1561Not AvailableNegative1302390 - 13025998061.98

Displaying genes 1531 – 1540 of 4085 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.