Slackia exigua ATCC 700122

anaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Coriobacteriia

Order

Eggerthellales

Family

Eggerthellaceae

Genus

Slackia

Description

Slackia exigua ATCC 700122 is an anaerobic bacterium characterized by its single replicon, which is indicative of its genetic structure. This species is part of the diverse microbiota found in the human body, particularly within the oral cavity and gastrointestinal tract. Its anaerobic nature suggests that it thrives in environments devoid of oxygen, which is common for many members of the human microbiome. The genome of Slackia exigua is represented in the publicly available accession ACUX00000000.2. This genomic information is crucial for understanding its metabolic pathways and potential interactions within its ecological niche. The ability to survive and proliferate in anaerobic conditions may allow Slackia exigua to play specific roles in the fermentation of dietary components, contributing to the overall balance of microbial communities in the gut. The presence of Slackia exigua in the human microbiome highlights the importance of anaerobic bacteria in maintaining health and homeostasis. These microorganisms can influence various physiological processes, including digestion and immune function. Their interactions with other microbial species and their host can provide insights into their ecological roles and potential applications in probiotic therapies or treatments for dysbiosis. Understanding the specific traits and behaviors of Slackia exigua can enhance our knowledge of microbial ecology in human health contexts.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassCoriobacteriia
OrderEggerthellales
FamilyEggerthellaceae
GenusSlackia
SpeciesSlackia exigua
StrainATCC 700122

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Slackia exigua ATCC 700122 S_exigua-2.0.1_Cont1.9, whole genome

Gene Summary

Adenine Count

402590 bp

Thymine Count

390180 bp

Guanine Count

644681 bp

Cytosine Count

657138 bp

Genome Length

2094589 bp

Protein-coding Genes

2029 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinHMPREF0762_00001Not AvailableNegative2442 - 279813040.7
peptidyl-prolyl cis-trans isomerase, cyclophilin-typeHMPREF0762_00002P0C1I4Positive2884 - 345020258.7
tetratricopeptide repeat proteinHMPREF0762_00003Not AvailablePositive3502 - 510655954.9
nucleoside diphosphate kinaseHMPREF0762_00004Q2RM94Positive5172 - 557914687.7
hypothetical proteinHMPREF0762_00005Q0A795Positive5786 - 625916953.2
transcription termination factor nusaHMPREF0762_00006Q9KA74Positive6315 - 750244463.2
translation initiation factor if-2HMPREF0762_00007C5D9C9Positive7522 - 10323101243.0
ribosome-binding factor aHMPREF0762_00008Q1GXD5Positive10411 - 1088717184.0
dhha1 domain proteinHMPREF0762_00009Q5SM25Positive10884 - 1188835989.7
trna pseudouridine synthase bHMPREF0762_00010B1MD72Positive11892 - 1283933974.8

Displaying genes 1 – 10 of 2084 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

446 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000848hexanoateC6H11O2Chemical structure of hexanoateNot available
Average115.1503Da
Monoisotopic115.075904596Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da

Displaying 1–10 of 446 metabolites

Health Effects

No health effects information available for this bacterium.