Rhodococcus erythropolis SK121

Gram-positiveRodNon-motileAerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus erythropolis SK121 is a gram-positive bacterium characterized by its rod shape and filamentous cell arrangement. It is an aerobic organism, requiring oxygen for growth, and is classified as mesophilic, with an optimal growth temperature of 20 degrees Celsius. This bacterium does not exhibit mobility, as it lacks flagella, yet it possesses a single membrane and replicon. Rhodococcus erythropolis SK121 is noted for its free-living biotic relationship, indicating that it does not depend on a host for survival and can thrive in a variety of habitats. This adaptability to multiple environments allows it to play significant roles in ecological processes, particularly in the degradation of pollutants and organic compounds. The presence of a single replicon suggests a streamlined genomic organization, which may contribute to its metabolic versatility. This versatility is often leveraged in bioremediation applications, where such microorganisms are utilized to break down hazardous substances in contaminated environments. Overall, the traits of Rhodococcus erythropolis SK121 highlight its ecological role as a free-living bacterium capable of thriving in diverse habitats, potentially aiding in environmental cleanup efforts through its metabolic processes.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus erythropolis
StrainSK121

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Rhodococcus erythropolis SK121
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementFilaments
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus erythropolis SK121 contig00004, whole genome shotgun

Gene Summary

Adenine Count

1276594 bp

Thymine Count

1271323 bp

Guanine Count

2113826 bp

Cytosine Count

2123655 bp

Genome Length

6785398 bp

Protein-coding Genes

6713 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
oxidoreductase, short chain dehydrogenase/reductase family proteinRHOER0001_3531Not AvailablePositive6562714 - 656355930496.0
hypothetical proteinRHOER0001_3533Not AvailablePositive6563608 - 656409017525.9
redox-sensitive transcriptional activator soxrRHOER0001_3532Not AvailableNegative6564076 - 656455517711.2
hypothetical proteinRHOER0001_3534Not AvailableNegative6564561 - 656504917818.0
arginine deiminaseRHOER0001_3535Not AvailablePositive6565149 - 656636643580.1
arsenate reductaseRHOER0001_3536Not AvailableNegative6566380 - 656673312931.6
nad dependent epimerase/dehydratase family proteinRHOER0001_3537Not AvailablePositive6566828 - 656751123795.2
transcriptional regulator, gntr familyRHOER0001_3538Not AvailablePositive6567554 - 656791312464.8
doxx family proteinRHOER0001_3539Not AvailablePositive6567962 - 656839314603.4
transporter, betaine/carnitine/choline familyRHOER0001_3540Not AvailablePositive6568478 - 657011257926.4

Displaying genes 6541 – 6550 of 6770 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.