Rhodococcus erythropolis SK121

Gram-positiveRodNon-motileAerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus erythropolis SK121 is a gram-positive bacterium characterized by its rod shape and filamentous cell arrangement. It is an aerobic organism, requiring oxygen for growth, and is classified as mesophilic, with an optimal growth temperature of 20 degrees Celsius. This bacterium does not exhibit mobility, as it lacks flagella, yet it possesses a single membrane and replicon. Rhodococcus erythropolis SK121 is noted for its free-living biotic relationship, indicating that it does not depend on a host for survival and can thrive in a variety of habitats. This adaptability to multiple environments allows it to play significant roles in ecological processes, particularly in the degradation of pollutants and organic compounds. The presence of a single replicon suggests a streamlined genomic organization, which may contribute to its metabolic versatility. This versatility is often leveraged in bioremediation applications, where such microorganisms are utilized to break down hazardous substances in contaminated environments. Overall, the traits of Rhodococcus erythropolis SK121 highlight its ecological role as a free-living bacterium capable of thriving in diverse habitats, potentially aiding in environmental cleanup efforts through its metabolic processes.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus erythropolis
StrainSK121

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Rhodococcus erythropolis SK121
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementFilaments
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus erythropolis SK121 contig00004, whole genome shotgun

Gene Summary

Adenine Count

1276594 bp

Thymine Count

1271323 bp

Guanine Count

2113826 bp

Cytosine Count

2123655 bp

Genome Length

6785398 bp

Protein-coding Genes

6713 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nitrile hydratase, alpha subunitRHOER0001_3329Not AvailableNegative6326568 - 632719122955.2
amidaseRHOER0001_3330Not AvailableNegative6327265 - 632883054614.5
branched-chain amino acid abc transporter, periplasmic amino acid-binding family proteinRHOER0001_3331Not AvailableNegative6328945 - 633035149558.7
transcriptional regulator, arsr familyRHOER0001_3332Not AvailableNegative6330396 - 633076413272.6
hypothetical proteinRHOER0001_3333Not AvailableNegative6330880 - 633194139737.4
transcriptional regulator, arac familyRHOER0001_3334Not AvailableNegative6332146 - 633312636136.6
transcriptional regulator, tetr familyRHOER0001_3335Not AvailablePositive6333302 - 633393722572.0
amp-binding enzymeRHOER0001_3336Not AvailablePositive6333974 - 633547954691.0
acyl-coa dehydrogenase, c-terminal domain proteinRHOER0001_3338Not AvailablePositive6335490 - 633718160659.0
lysr substrate binding domain proteinRHOER0001_3337Not AvailableNegative6337178 - 633805631045.4

Displaying genes 6311 – 6320 of 6770 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.