Rhodococcus erythropolis SK121

Gram-positiveRodNon-motileAerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus erythropolis SK121 is a gram-positive bacterium characterized by its rod shape and filamentous cell arrangement. It is an aerobic organism, requiring oxygen for growth, and is classified as mesophilic, with an optimal growth temperature of 20 degrees Celsius. This bacterium does not exhibit mobility, as it lacks flagella, yet it possesses a single membrane and replicon. Rhodococcus erythropolis SK121 is noted for its free-living biotic relationship, indicating that it does not depend on a host for survival and can thrive in a variety of habitats. This adaptability to multiple environments allows it to play significant roles in ecological processes, particularly in the degradation of pollutants and organic compounds. The presence of a single replicon suggests a streamlined genomic organization, which may contribute to its metabolic versatility. This versatility is often leveraged in bioremediation applications, where such microorganisms are utilized to break down hazardous substances in contaminated environments. Overall, the traits of Rhodococcus erythropolis SK121 highlight its ecological role as a free-living bacterium capable of thriving in diverse habitats, potentially aiding in environmental cleanup efforts through its metabolic processes.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus erythropolis
StrainSK121

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Rhodococcus erythropolis SK121
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementFilaments
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus erythropolis SK121 contig00004, whole genome shotgun

Gene Summary

Adenine Count

1276594 bp

Thymine Count

1271323 bp

Guanine Count

2113826 bp

Cytosine Count

2123655 bp

Genome Length

6785398 bp

Protein-coding Genes

6713 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
diguanylate cyclase (ggdef) domain proteinRHOER0001_2328Not AvailablePositive50124 - 5126641977.3
e1-e2 atpaseRHOER0001_2329Not AvailableNegative51273 - 5377788078.6
hypothetical proteinRHOER0001_2330Not AvailableNegative53854 - 5496940367.8
enoyl-coa hydratase/isomerase family proteinRHOER0001_2331Not AvailableNegative55032 - 5576325973.2
pyridine nucleotide-disulfide oxidoreductaseRHOER0001_2332Not AvailablePositive55876 - 5697939770.3
phospholipase d domain proteinRHOER0001_2333Not AvailablePositive56976 - 5841853498.6
hypothetical proteinRHOER0001_2334Not AvailableNegative58423 - 5893218480.8
atpase/histidine kinase/dna gyrase b/hsp90 domain proteinRHOER0001_2335Not AvailablePositive59302 - 62157100879.0
roadblock/lc7 domain proteinRHOER0001_2336Not AvailablePositive62154 - 6257014038.9
hypothetical proteinRHOER0001_2337Not AvailablePositive62576 - 6295013436.2

Displaying genes 51 – 60 of 6770 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.