Rhodococcus erythropolis SK121

Gram-positiveRodNon-motileAerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus erythropolis SK121 is a gram-positive bacterium characterized by its rod shape and filamentous cell arrangement. It is an aerobic organism, requiring oxygen for growth, and is classified as mesophilic, with an optimal growth temperature of 20 degrees Celsius. This bacterium does not exhibit mobility, as it lacks flagella, yet it possesses a single membrane and replicon. Rhodococcus erythropolis SK121 is noted for its free-living biotic relationship, indicating that it does not depend on a host for survival and can thrive in a variety of habitats. This adaptability to multiple environments allows it to play significant roles in ecological processes, particularly in the degradation of pollutants and organic compounds. The presence of a single replicon suggests a streamlined genomic organization, which may contribute to its metabolic versatility. This versatility is often leveraged in bioremediation applications, where such microorganisms are utilized to break down hazardous substances in contaminated environments. Overall, the traits of Rhodococcus erythropolis SK121 highlight its ecological role as a free-living bacterium capable of thriving in diverse habitats, potentially aiding in environmental cleanup efforts through its metabolic processes.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus erythropolis
StrainSK121

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Rhodococcus erythropolis SK121
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementFilaments
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus erythropolis SK121 contig00004, whole genome shotgun

Gene Summary

Adenine Count

1276594 bp

Thymine Count

1271323 bp

Guanine Count

2113826 bp

Cytosine Count

2123655 bp

Genome Length

6785398 bp

Protein-coding Genes

6713 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transporter, major facilitator family proteinRHOER0001_2448Not AvailableNegative167703 - 16893541876.4
fmn-dependent oxidoreductase, nitrilotriacetate monooxygenase familyRHOER0001_2449Not AvailableNegative168932 - 17027849139.6
abc transporter, permease proteinRHOER0001_2450Not AvailableNegative170310 - 17118230823.5
abc transporter, atp-binding proteinRHOER0001_2451Not AvailableNegative171175 - 17199630374.5
nmt1/thi5-like proteinRHOER0001_2452Not AvailableNegative171993 - 17307238819.3
hypothetical proteinRHOER0001_2453Not AvailablePositive173071 - 1731904226.95
sigma-70 region 2RHOER0001_2455Not AvailablePositive173350 - 17431234147.5
hypothetical proteinRHOER0001_2454Not AvailableNegative174288 - 17600961485.9
acyl-coa dehydrogenase, c-terminal domain proteinRHOER0001_2456Not AvailablePositive176197 - 17737542965.2
transcriptional regulator, tetr familyRHOER0001_2457Not AvailableNegative177380 - 17800623305.1

Displaying genes 171 – 180 of 6770 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.