Acidaminococcus intestini strain D21

Gram-negativeCocciAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Negativicutes

Order

Acidaminococcales

Family

Acidaminococcaceae

Genus

Acidaminococcus

Description

Acidaminococcus intestini strain D21 is characterized as a Gram-negative, anaerobic cocci bacterium. This strain is part of the Acidaminococcus genus, which is known for its role in the gut microbiota of various hosts. A notable feature of strain D21 is that it possesses a single replicon, which is indicative of its genomic organization. The anaerobic nature of Acidaminococcus intestini strain D21 suggests that it thrives in low-oxygen environments, such as the intestines of mammals, where it may contribute to various metabolic processes. Its cocci shape is typical of many bacteria within the same genus, reflecting common structural and functional traits that may influence its interactions within the gut microbiome. The strain is cataloged under the accession number ACGB00000000.1, which provides a reference for researchers seeking to explore its genetic and biochemical properties further. The study of Acidaminococcus intestini strain D21 can enhance our understanding of gut microbial communities and their contributions to host health, including metabolic functions and the maintenance of intestinal homeostasis. In summary, Acidaminococcus intestini strain D21 exemplifies the characteristics of anaerobic cocci bacteria within the gut microbiome, and its presence may play a significant role in the complex interactions that define microbial ecology in intestinal environments.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassNegativicutes
OrderAcidaminococcales
FamilyAcidaminococcaceae
GenusAcidaminococcus
SpeciesAcidaminococcus intestini
Strainstrain D21

Profile

Physiology
Gram staining propertiesNegative
ShapeCocci
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathuman gut
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Acidaminococcus intestini strain D21 cont1.79, whole genome

Gene Summary

Adenine Count

555430 bp

Thymine Count

559582 bp

Guanine Count

553345 bp

Cytosine Count

570615 bp

Genome Length

2238973 bp

Protein-coding Genes

1958 genes

Non-Coding Genes

115 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinACDG_00162Not AvailablePositive153201 - 15371019787.7
Hypothetical proteinACDG_00163Not AvailablePositive153952 - 15440717104.8
Large terminaseACDG_00164Not AvailablePositive154409 - 15566548177.8
Portal proteinACDG_00165Not AvailablePositive155720 - 15708150400.1
Head morphogenesis proteinACDG_00166Not AvailablePositive157089 - 15857656796.1
hypothetical proteinACDG_00167Not AvailablePositive158945 - 15932514180.8
hypothetical proteinACDG_00168Not AvailablePositive159389 - 16006924164.5
Capsid proteinACDG_00169Not AvailablePositive160076 - 16094231157.0
Tail assembly chaperoneACDG_00170Not AvailablePositive160945 - 16139416548.8
hypothetical proteinACDG_00171Not AvailablePositive161399 - 16179714341.0

Displaying genes 81 – 90 of 2073 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

83 records
Metabolite IDMetabolite nameStructureCAS number
BASm00055001-octadecanoyl-sn-glycero-3-phosphateC21H41O7PChemical structure of 1-octadecanoyl-sn-glycero-3-phosphateNot available
Average436.5198Da
Monoisotopic436.2589902Da
BASm0014033AmmoniaH3NChemical structure of Ammonia7664-41-7
Average17.0305Da
Monoisotopic17.026549101Da
BASm0014041Oleic acidC18H34O2Chemical structure of Oleic acid112-80-1
Average282.4614Da
Monoisotopic282.255880332Da
BASm0014058Myristic acidC14H28O2Chemical structure of Myristic acid544-63-8
Average228.3709Da
Monoisotopic228.20893014Da
BASm0014182Vaccenic acidC18H34O2Chemical structure of Vaccenic acidNULL
Average282.468Da
Monoisotopic282.255880335Da
BASm0014219Palmitoleic acidC16H30O2Chemical structure of Palmitoleic acidNULL
Average254.4082Da
Monoisotopic254.224580204Da
BASm0014222DiethanolamineC4H11NO2Chemical structure of DiethanolamineNULL
Average105.1356Da
Monoisotopic105.078978601Da
BASm0017263NADPC21H29N7O17P3Chemical structure of NADP53-59-8
Average744.4129Da
Monoisotopic744.083277073Da
BASm0017395CDP-DG(16:0/18:1(9Z))C46H83N3O15P2Chemical structure of CDP-DG(16:0/18:1(9Z))NULL
Average980.124Da
Monoisotopic979.529942981Da
BASm0017399CDP-DG(18:0/18:1(9Z))C48H87N3O15P2Chemical structure of CDP-DG(18:0/18:1(9Z))NULL
Average1008.178Da
Monoisotopic1007.561243109Da

Displaying 1–10 of 83 metabolites

Health Effects

No health effects information available for this bacterium.