Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BSEG_03682 | Not Available | Negative | 1299126 - 1299482 | 14020.9 |
| hypothetical protein | BSEG_03681 | A6L1J0 | Negative | 1299500 - 1299865 | 14123.8 |
| hypothetical protein | BSEG_03680 | Not Available | Positive | 1299899 - 1300174 | 11043.6 |
| cytidine and deoxycytidylate deaminase zinc-binding region | BSEG_03679 | Q99W51 | Positive | 1300176 - 1300610 | 15697.1 |
| hypothetical protein | BSEG_03678 | Not Available | Negative | 1300614 - 1300910 | 11342.3 |
| putative cdp-diacylglycerol-serine o-phosphatidyltransferase | BSEG_03677 | P39823 | Negative | 1300963 - 1301670 | 26116.5 |
| phosphatidylserine decarboxylase | BSEG_03676 | A6L1J5 | Negative | 1301682 - 1302368 | 25900.0 |
| dna polymerase iii, alpha subunit | BSEG_03675 | O51526 | Positive | 1302560 - 1306357 | 143936.0 |
| thioredoxin | BSEG_03674 | P00275 | Positive | 1306399 - 1306713 | 11454.8 |
| hypothetical protein | BSEG_03673 | Not Available | Positive | 1306748 - 1307083 | 12877.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

