Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BSEG_04648 | Not Available | Positive | 1286039 - 1286128 | 3289.96 |
| ribosome recycling factor | BSEG_03691 | A6L1H8 | Negative | 1286137 - 1286697 | 20796.2 |
| phosphoglycerate mutase family protein | BSEG_03690 | P39701 | Positive | 1287224 - 1287742 | 19582.7 |
| hypothetical protein | BSEG_03689 | Not Available | Negative | 1287765 - 1291022 | 121283.0 |
| hypothetical protein | BSEG_03688 | Not Available | Negative | 1291047 - 1293155 | 79959.4 |
| glycosyl hydrolase, family 88 | BSEG_03687 | P0A3U6 | Negative | 1293210 - 1294448 | 47110.1 |
| ump kinase | BSEG_03686 | A6L1I4 | Negative | 1294706 - 1295416 | 25645.3 |
| mate efflux family protein | BSEG_03685 | P28303 | Negative | 1295455 - 1296780 | 48931.7 |
| peptidase, s41 family | BSEG_03684 | Not Available | Positive | 1296939 - 1298378 | 54046.5 |
| biotin--[acetyl-coa-carboxylase] ligase | BSEG_03683 | Q59014 | Negative | 1298375 - 1299142 | 29336.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

