Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BSEG_03701 | Not Available | Positive | 1268518 - 1270503 | 74525.5 |
| hydrolase coce/nond family protein | BSEG_03700 | Q9L9D7 | Negative | 1270647 - 1272554 | 73917.9 |
| fumarate hydratase class i, aerobic | BSEG_03699 | P14407 | Positive | 1272694 - 1274337 | 60429.6 |
| alpha-n-acetylglucosaminidase (naglu) | BSEG_03698 | P54802 | Positive | 1274442 - 1276595 | 82429.0 |
| amino acid permease | BSEG_03697 | O07576 | Negative | 1276767 - 1278425 | 59811.5 |
| outer membrane efflux protein | BSEG_03696 | Not Available | Negative | 1278514 - 1279833 | 50543.6 |
| rnd transporter, hae1 family | BSEG_03695 | Q57124 | Negative | 1279830 - 1282865 | 112028.0 |
| efflux transporter, rnd family, mfp subunit | BSEG_03694 | Not Available | Negative | 1282885 - 1283961 | 39658.0 |
| peptidase, m28 family | BSEG_03693 | Q02PA2 | Negative | 1284048 - 1285070 | 38392.9 |
| ribosome small subunit-dependent gtpase a | BSEG_03692 | A6L1H7 | Negative | 1285084 - 1286016 | 35100.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

