Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BSEG_04647 | Not Available | Negative | 1248248 - 1248442 | 6780.13 |
| hypothetical protein | BSEG_04401 | Not Available | Negative | 1249481 - 1250269 | 28533.5 |
| hypothetical protein | BSEG_04402 | Not Available | Negative | 1250294 - 1251835 | 57146.1 |
| tonb-linked outer membrane protein, susc/raga family | BSEG_04403 | Not Available | Negative | 1251860 - 1254721 | 106170.0 |
| site-specific recombinase, phage integrase family | BSEG_04385 | Q7ZAM5 | Negative | 1256182 - 1257342 | 44985.7 |
| tonb-linked outer membrane protein, susc/raga family | BSEG_04384 | Not Available | Positive | 1257711 - 1260839 | 115121.0 |
| susd family protein | BSEG_04383 | Not Available | Positive | 1260852 - 1262348 | 56718.5 |
| tonb-linked outer membrane protein, susc/raga family | BSEG_03704 | Not Available | Positive | 1262532 - 1265549 | 112067.0 |
| susd family protein | BSEG_03703 | Not Available | Positive | 1265573 - 1267159 | 58752.5 |
| gtp-binding protein hflx | BSEG_03702 | A6H294 | Positive | 1267251 - 1268504 | 47620.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

